Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0250 ATGTTAATATCTCATCCATATTCTAAAGTAGCAACAACAATAATATTTGTTGTGGCTCAAATATGGTTGACAGTGAATTCGTTTTCAGAAGAAGATGAGATACACATCTTGCCGGGACAACCGCCTGTGGACTTCCGGCAATTTGCTGGTTATATTACAGTTGATGATGCGCATCAAAGATATTTGTTTTACTACTTTGTTGAAGCAGAAGGAGACTATTTGTCCAAGCCTCTGGTTCTCTGGTTGCAGGGAGGGCCCACTTCTTCTGCCCTTGGATATGGAGCTTTCAAGGAACACGGTCCTTTCAAGGTGAGAGAAGACGCTCTTGAGAAAAATGATTATAGTTGGAACAAAGTGGCAAATATGATTTACTTGGAATCCCCATCTGGAGTTGGTTTCTCGTTCTCTTCTAATCAATCTTTTTATGGATTTGTCAACGATGAAATTACAGCAAGAGACAATCTTGTGTTCCTACAGCGTTGGATGAAGAAATTCCCAGAATACAGGAACAATGCTTTCTTTATCGCCGGAGAAAGCTATGGAGGTCACTATGTCCCTCAACTAGCACAACTCATCATTCAGACCAACACTCCGTTCAATCTCAAAGGAATTGCAATAGGGAATCCTGTTCTAGAATTCAGTACTTACAATTCAGTGGGAGAATTTCTGTGGTCCCGTGGACTGCTATCAGATTCAACTTACCAAAGCTTGAACACAGCATGCAACTATTCCCAAATAGTGAGGGAAATGGTGATAAGTAAGATTGTCACACCTGTTTGTGAAGGAGTACATAAACAAGTGCTTGGAGAGATTAGTGAGCATGTTATTCTAGGCGATGTCTCTCTTGATTCATGTTTGCCCACTACCCAACTGAATTACTTCAACCGGAAAGATGTAAAAGAAGCTCTTCATGCTAAACTTATAGGAGTTACCACGTGGTCACTTGGCCGTAGCGAAGTTGTCAAGTATTATATGCAGGATTTAGAGATGCCCATAGTTCCTATCCTCAAGCAACTGCTTGAGTCAGGTCTTCGAGTACATGTATACAGTGGAGATCAAGATGCAGTGATTCCACTAACTGGGACTCGAACACTGGTGAATGAATTAGCCGAGGAGATGGAACTGAATTCAACTGTGCCTTATAGAAGCTGGTTTCAAGGAAGAAAGATTGCTGGATGGACACAAGTGTATGGTGATAACATTTTATCATTTGCAACCATAAAAGGAGGAGGTCATATGGCTCCATTTTCACAACCGGAAAGATCATTGGCGGTGTTTCAAGCCTTTCTCCGAGGAAAGCCGCTCAGGGGTGCATCCCATTCTTCGTAA 1329 0.4184 MLISHPYSKVATTIIFVVAQIWLTVNSFSEEDEIHILPGQPPVDFRQFAGYITVDDAHQRYLFYYFVEAEGDYLSKPLVLWLQGGPTSSALGYGAFKEHGPFKVREDALEKNDYSWNKVANMIYLESPSGVGFSFSSNQSFYGFVNDEITARDNLVFLQRWMKKFPEYRNNAFFIAGESYGGHYVPQLAQLIIQTNTPFNLKGIAIGNPVLEFSTYNSVGEFLWSRGLLSDSTYQSLNTACNYSQIVREMVISKIVTPVCEGVHKQVLGEISEHVILGDVSLDSCLPTTQLNYFNRKDVKEALHAKLIGVTTWSLGRSEVVKYYMQDLEMPIVPILKQLLESGLRVHVYSGDQDAVIPLTGTRTLVNELAEEMELNSTVPYRSWFQGRKIAGWTQVYGDNILSFATIKGGGHMAPFSQPERSLAVFQAFLRGKPLRGASHSS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0250 442 ProSitePatterns Serine carboxypeptidases, histidine active site. 402 419 IPR033124 GO:0004185
Mibi12g0250 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Mibi12g0250 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Mibi12g0250 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Mibi12g0250 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Mibi12g0250 442 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Mibi12g0250 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 419 IPR001563 GO:0004185|GO:0006508
Mibi12g0250 442 SUPERFAMILY alpha/beta-Hydrolases 37 435 IPR029058 -
Mibi12g0250 442 Gene3D alpha/beta hydrolase 27 436 IPR029058 -
Mibi12g0250 442 FunFam Carboxypeptidase 332 432 - -
Mibi12g0250 442 FunFam Carboxypeptidase 27 436 - -
Mibi12g0250 442 Pfam Serine carboxypeptidase 38 432 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0250 Mibi-ChrMibi12 5725560 5731288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0250 295 435 Calmodulin-binding Proteins AT2G22960 31.206 8.35e-14 67.8