Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0218 ATGAGGAAGCCATGCTGTGATAAGCAAGACATGAACAAAGGAGCTTGGTCCAAACAAGAGGACCAGAAACTTATTGATTACATCAACAAACATGGCGAGGGTTGCTGGCGTACTCTTCCTCAAGCTGCAGGACTACTTCGCTGCGGTAAAAGTTGTAGGCTGAGGTGGATAAATTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTGCTTGGCAACCGTTGGTCTCTCATAGCTGGAAGACTACCGGGAAGGACAGACAATGAAGTAAAAAATTATTGGAATTCTCATCTAAGAAGAAAGCTCATTAACATGGGAATCGATCCAAATAATCACAGACTCTCTCACAAATCCCCTTCTCTTCATCAAAATCAAACAACAACTTCTGGTAGCTCAGCTTCGTCAGGCCTAATGAAGAAACACAGAGATAATCTCAAGAACAATATAAATGAGCCAGTAACAAAGAAGCCTCAAACTACTGGTAGTGCTGGTAATTATTATGAACAAGTTTCAGATGCTGCAAGTGGGTTGGAAGATGAGTCCTCTGGCTTATTGCCTGATCTAAATCTTGATCTCACAATCAACTTCCCTTCAGCCATATTACCCAATAGTAGTAATGCTGCTTATGATCATGAAGACGATAATCAAAAGCCAATAATTCACCATCATGAATCTAAGTCACCCAGGACTATGCAATTAGCTTCCTCTCCAACCCTACTTCTGTTTCAATGA 771 0.4125 MRKPCCDKQDMNKGAWSKQEDQKLIDYINKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRLSHKSPSLHQNQTTTSGSSASSGLMKKHRDNLKNNINEPVTKKPQTTGSAGNYYEQVSDAASGLEDESSGLLPDLNLDLTINFPSAILPNSSNAAYDHEDDNQKPIIHHHESKSPRTMQLASSPTLLLFQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0218 256 CDD SANT 15 60 IPR001005 -
Mibi12g0218 256 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Mibi12g0218 256 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mibi12g0218 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mibi12g0218 256 MobiDBLite consensus disorder prediction 163 178 - -
Mibi12g0218 256 CDD SANT 68 111 IPR001005 -
Mibi12g0218 256 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi12g0218 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mibi12g0218 256 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mibi12g0218 256 Gene3D - 67 171 - -
Mibi12g0218 256 MobiDBLite consensus disorder prediction 124 151 - -
Mibi12g0218 256 MobiDBLite consensus disorder prediction 235 256 - -
Mibi12g0218 256 MobiDBLite consensus disorder prediction 159 178 - -
Mibi12g0218 256 FunFam MYB-related transcription factor 12 65 - -
Mibi12g0218 256 FunFam MYB transcription factor 67 128 - -
Mibi12g0218 256 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 205 - -
Mibi12g0218 256 MobiDBLite consensus disorder prediction 242 256 - -
Mibi12g0218 256 SMART sant 65 113 IPR001005 -
Mibi12g0218 256 SMART sant 12 62 IPR001005 -
Mibi12g0218 256 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mibi12g0218 256 Gene3D - 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0218 Mibi-ChrMibi12 4378776 4380431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0218 2 213 MYB Transcription Factor Family AT4G38620 54.545 1.19e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g0218 Myb_DNA-binding 1.7e-14 CL0123