Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0208 ATGGCTAGTAGCAGTAACAATGAAGTGGACATCGTAAATATGGAGGAAGGTGAAACTAAAGCCTCAAAAGGATCTGGTTTCTGTGGTTCTCCTTCCACAGTTCTAATCATACAGAAGGTAATTGCAGAGGTAATAGGGACATACCTAGTGGTATTTGCAGGGTGTTGTTCAATTGTTTTGAATGTGTTAGATGGGAGGGTAACATTTCCTGGAATATGTCTGGTTTGGGGCTTAATAGTTATGATAATGATTTATTCGGTGGGCCATATCTCCGGCGGCCACTTTAATCCGGCGGTGACCGTGGCGTTCACCATATTCCGGCATTTTCCATGGAAGCATCTACCACTATATATTGTAGCACAAGTGGTTGGATCAGTACTAGCCAGTGGCACATTGTACATGTTGTTTGAGGTAAACGACAAGTCGTATTATGGGACTTTGCCTTCTGGATCAAATGTTCAGTCACTTGTAATGGAGATCATTGCTTCTTTCCTGTTGATGTTCGTTGTTTCTGCTGTTGCCACTGATTCTAGAGCCATAGGAGAATTGGCAGGAATTGCAGTTGGCATGACCATTACTGTAGATGTCTTCATTGCTGGGCCAGTGTCAGGAGCATCAATGAACCCAGCAAGGAGTATTGGGCCAGCGATAGTGTTGCACAAATATGGATCAATATGGGTTTATATAATTGGCCCTCTTATTGGCACCATTCTTGGAGGATTTGTCTATAGCCTTATTAGATACACTGATAAGCCTCTTCGTGAACTCAGAAAAGCCCCCTCTACTATCTTCAAAAGCAGCTCGACTCGCTTCATTTAA 819 0.4298 MASSSNNEVDIVNMEEGETKASKGSGFCGSPSTVLIIQKVIAEVIGTYLVVFAGCCSIVLNVLDGRVTFPGICLVWGLIVMIMIYSVGHISGGHFNPAVTVAFTIFRHFPWKHLPLYIVAQVVGSVLASGTLYMLFEVNDKSYYGTLPSGSNVQSLVMEIIASFLLMFVVSAVATDSRAIGELAGIAVGMTITVDVFIAGPVSGASMNPARSIGPAIVLHKYGSIWVYIIGPLIGTILGGFVYSLIRYTDKPLRELRKAPSTIFKSSSTRFI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0208 272 CDD MIP 38 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 SUPERFAMILY Aquaporin-like 36 256 IPR023271 -
Mibi12g0208 272 Pfam Major intrinsic protein 33 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 PANTHER AQUAPORIN NIP2-1 18 255 IPR034294 -
Mibi12g0208 272 TIGRFAM MIP: MIP family channel proteins 42 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi12g0208 272 Gene3D Glycerol uptake facilitator protein. 3 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0208 Mibi-ChrMibi12 4078884 4081265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0208 7 261 Major Intrinsic Protein MIP AT5G37820 62.162 1.33e-116 335