Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0205 ATGGATTCAACAGCGAGATCCAACTCTCTCACACTTCTCATCATCTTCTCCATCTTCATCTGTAATGTCTCTGCTTCTTCAAATCCAACCCCTTCCTTTCCAAAACAAGCCTTGCCCACAAAATCTGGCTACCTCCCAGTGAACCCCACATCCAAATCTGCCATTTTTTACACTTTCTATGAAGCCCAGAAACTCACTTCACCTCTCTCCCAAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGTTGCTCCTCCATGATTGGCAACTTCTTCGAGCTTGGACCATGGCGTGTCACCAAATCCTTGAATCTGATTCCCAATCCTGGTTTTTGGAATAGAATTTTTGGCCTTCTTTTCCTTGATAACCCAGTCGGAACTGGATTCAGTATTGCTTCAGGTCCTGAGGAAATCCCTAGAGACCAAAATTCAGTGGCCAAACACCTCTTCACTGCTATAACTGAGTTCATTCAACTGAACCCCGCTTTTAAGGATCGCCCAATCTATATAACTGGCGAAAGCTATGCTGGGAAGTACGTTCCTGCAATTGGGTATTACATATTACAAATGAATTCACATTTAAATGTTTCACAGAGGGTGAAGTTAGCAGGCGTGGCGATTGGGGATGGGCTGACTGATCCAGTGACACAAGTCACTACTCATGCTGTGAATGCTTACTTCTTAGGATTGATCAACGAGAGGCAGAAGAATGAGTTGGAGAAGGCTCAATTTGAAGCGGTCAGGCTGATCAAAATGGGGCATTGGAGTGCAGCAAGAGAAGCAAGAAACAGTGTTTTCAGATTGTTACATAACATGACAGGGTTGGCTACTTCGTTTGACTTCACAAGAAAAGCTCCCTATGAGAGTGATTTGGTCACTGATTTCTTGAAATCCAGTGAGGTGAAGAAGGCATTAGGGGTGAATGAGTCACTTGTTTTTGAAGGATGTAGTGATACTGTAAAAGCTGCATTCCATGAGGATGTGATGAAGAGTGTGAAGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTTCTATATCAAGGGCAGCATGATCTAAGAGATGGTCCAGTTCAAGTAGAAGCATGGGTGAAGACAATGAAATGGGAAGGAATTAAGAAGTATTTGAATGCAGATAGGAAGATATGGAGAGTGAATGGCGAGCTTGCAGGATATGTGCAAAAATGGCAAAGCCTCACTAATGTTGTGGTTTTGGGAGGTGGCCATTATTTGCCAGCTGATCAAGCAGTGAATTCTCAAGCCATGATTGAAAACTGGGTTTTCCAGAAGGATTTGTTTGGGAATCATCAACAGGATAATGTTTAG 1329 0.4364 MDSTARSNSLTLLIIFSIFICNVSASSNPTPSFPKQALPTKSGYLPVNPTSKSAIFYTFYEAQKLTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLIPNPGFWNRIFGLLFLDNPVGTGFSIASGPEEIPRDQNSVAKHLFTAITEFIQLNPAFKDRPIYITGESYAGKYVPAIGYYILQMNSHLNVSQRVKLAGVAIGDGLTDPVTQVTTHAVNAYFLGLINERQKNELEKAQFEAVRLIKMGHWSAAREARNSVFRLLHNMTGLATSFDFTRKAPYESDLVTDFLKSSEVKKALGVNESLVFEGCSDTVKAAFHEDVMKSVKYMVEYLVTKTRVLLYQGQHDLRDGPVQVEAWVKTMKWEGIKKYLNADRKIWRVNGELAGYVQKWQSLTNVVVLGGGHYLPADQAVNSQAMIENWVFQKDLFGNHQQDNV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0205 442 ProSitePatterns Serine carboxypeptidases, serine active site. 170 177 IPR018202 GO:0004185
Mibi12g0205 442 Pfam Serine carboxypeptidase 37 429 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 FunFam Carboxypeptidase 24 435 - -
Mibi12g0205 442 Gene3D alpha/beta hydrolase 22 441 IPR029058 -
Mibi12g0205 442 SUPERFAMILY alpha/beta-Hydrolases 39 432 IPR029058 -
Mibi12g0205 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 416 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Mibi12g0205 442 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0205 Mibi-ChrMibi12 4016888 4018216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0205 300 428 Calmodulin-binding Proteins AT2G22960 24.060 6.41e-10 56.6