Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0198 ATGGAAGACCAAGTTGTTCAGAGAGTCTTCCATGAAGGAGGTCGCGACTATTATCAACAACAACCTTCTACATCTTCATCTTCTTCTTCCTCCATCCTTCAATCTCTTCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAGTAAAATCTATCCAAGAACTTCGAGAGAAAAAAGAGGGTCTTGTTACAATTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTTGCATCTGTTATTGGTTGCACTGTTATATCGATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGAATTCTATAGACTTTGATGCGTTGGTCAAGAATCTTGAGGATTTGACCAAAGGCAATGACACGGTGATTCCTGTGTTTGATTATCAACAAAAGAGACGTGTTGGCTATAAAGCAATAGAAAGTGCTTCGTCAGGGGTGGTAGTAGTTGATGGTACATATGCTCTACATGCGAAACTGCGGTCTTTGCTAGATGTTCGAGTTGCTGTGGTTGGCGGTGTTCACTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAGCCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCGTCATTTAGAGAAGCCATCTATAAGGTGAAATGCAGAAGTGAGTCCCCTGATGGGCATTTGGGTTCTGCCTTTCCACAAGATGAAGTCCAAACGGACAATTGTATAGAGATGTATCTTAGACCTCCCTCAGCTAGTGAAGAAGCAAGGATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGAATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTTGTTAGCTATAAACGTGCATCCACAACAGTCAGTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGCTGAGGGGAACAGATAGGAAAACAGTTGGAACGGAAGCATTAAAGATGGGTGTAAGTGGCCCGTGGATCACTAAATCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACCGTTGCCTGGTAATCAAGGAGGAGTAATTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACATTGTAACTGGAATTGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTGAGACTGACAACACAGTAATAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTGGGAATCGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATAGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACAAGTGAAGGATTTTAAATATGATAACTTCAGCTCGCTTGATCTGGCCTTGCTATCAAAGAATATTGATGACATACGGAATGTTCGGAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTCTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACACTTGATATCTCGAGTTCAAAGGGATAAGAGTAGAATGGGATGTTTTATGTCCCAAAATGAGATTATGGTGACAGTATTTCCTATGTTCCAGTTGCACATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGATCCTGTCCTTTCCCCAGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAGGTAGCTTATCAAGATATTCTTGCGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTCCAGAAGTTCATTGATTTATATTTAAAGCTTCCCGGGATCCCCTCTAACGGACAGTTGACAGAGGGTGACTGTATAAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTAATACGTGAGCCTATTAGAGAAGGAAACTACATCATTCAGCCCAAAGTGGATTTTGATATTGGCATTAGTACTGTTACAGGTCTTCTTAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTATCAGGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGACACATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTGCCTGCTCTGGAAAGAACTTTTGGTGGCATCTACGCTCAGCAGTCTGCTAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTCAGCATCGGAATGCTCTCCACGCAGAGTGGCATCCCCTATTGAAGGGATTATTGAGGAGATGCAATCCAGGATTAGAAGGCTAGAGCGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTATTGTGGGTTATTCATTATATCAAAGGAAGCGTCAATGA 2862 0.4116 MEDQVVQRVFHEGGRDYYQQQPSTSSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTIGIGGPSGSGKTSLAEKVASVIGCTVISMENYRNGVDEGNDLNSIDFDALVKNLEDLTKGNDTVIPVFDYQQKRRVGYKAIESASSGVVVVDGTYALHAKLRSLLDVRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSAFPQDEVQTDNCIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNGNVSVSFETIDALGETYMVLRGTDRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNTPLPGNQGGVIVAPKPIRVTPDIVTGIEDLSQPWTRSPRKSKMEPVIATWRFISSDSSETDNTVIDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDSGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRMGCFMSQNEIMVTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDPAKFCSSVQKFIDLYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNYIIQPKVDFDIGISTVTGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDDTYTTKSYLQIILENLPALERTFGGIYAQQSARMQEIVEFIQSQGSSSASECSPRRVASPIEGIIEEMQSRIRRLERWLTVNTVLWTFLMSAIVGYSLYQRKRQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0198 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 177 IPR027417 -
Mibi12g0198 953 CDD UMPK_like 520 688 - -
Mibi12g0198 953 CDD UMPK_like 76 227 - -
Mibi12g0198 953 Gene3D - 517 694 IPR027417 -
Mibi12g0198 953 SUPERFAMILY CYTH-like phosphatases 726 860 IPR033469 -
Mibi12g0198 953 Pfam Phosphoribulokinase / Uridine kinase family 520 685 IPR006083 GO:0005524|GO:0016301
Mibi12g0198 953 Pfam Phosphoribulokinase / Uridine kinase family 66 224 IPR006083 GO:0005524|GO:0016301
Mibi12g0198 953 SMART AAA_5 517 661 IPR003593 -
Mibi12g0198 953 SMART AAA_5 62 212 IPR003593 -
Mibi12g0198 953 Gene3D - 704 865 - -
Mibi12g0198 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 688 IPR027417 -
Mibi12g0198 953 PANTHER URIDINE KINASE 10 275 - -
Mibi12g0198 953 Gene3D - 64 243 IPR027417 -
Mibi12g0198 953 PRINTS Uridine kinase signature 545 556 - -
Mibi12g0198 953 PRINTS Uridine kinase signature 518 535 - -
Mibi12g0198 953 PRINTS Uridine kinase signature 639 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0198 Mibi-ChrMibi12 3957412 3971438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0198 513 654 PRT Gene Family AT1G55810 25.974 7.62e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0198 12 3957412 3971438 Mibi12g0198 12 3957412 3971438 ECH