Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0153 ATGAACAAATCTAAGAGTTTTGTTCAAAGCATTATGAAACATCTCAAATTCGGTTCAAGAAGAGAGAGACAGAACGAAGAAGACGTTCAGAGAATCGCTGCGAGGGAGCAGAAGGTGTTTTCCTATGAAACGTTAGTTTCTGCGACGAAGAATTTCAATTCTCGTCACAAGCTTGGCGAGGGAGGATTTGGACCAGTTTACAAGGGGAAGCTTGAAGATGGCAGGGAGATAGCAGTGAAGAAGCTATCAGTGAGATCAAACCAGGGGAAGAAGGAGTTCATCAATGAGGCAAAATTGTTGGCGCGTGTACAGCACCGCAATGTTGTGAATCTGTTGGGATATTGTGCCTATGGTTCCGAGAAGCTTCTTGTGTATGAATATGTTCCTCATGAGAGCCTTGACAAAATCCTCTTCAAATCAGATAGGAGAAAAGAGCTTGACTGGCCAAAGAGGTTTGGAATAATAATAGGAATAGCTAGAGGATTGCTTTATCTTCATGAAGATTCACATGACTGCATTATCCACAGAGACATAAAAGCTAGCAATGTTTTGCTTGATGATAAATGGAACCCTAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCATGTCAAAACTCGTGTGGCTGGAACCAATGGATACATGGCTCCGGAATATATAATGTATGGACGTTTATCGACAAAAGCAGATGTATTTAGTTTTGGAGTTCTGATGCTGGAGATCATTAGCGGTCAACGAAACTTATCATTTAACTTGGATGTGGATGCACAGAATCTTATCGACTGGGCATACAAGCTTTACAAAAAAGGACGAAGCTTAGAAATCATGGACAGTGCAATAGCAGCTTCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAACTAGGCCTACTATGCATTCAAGGTGACCCAAATGCCCGCCCCACCATGCACCGGGTGGTGGTGGTGTTGTCGAAAAAACCAGGCCACTTGGAAGAACCGAGAAAACCCGGTGTGCCGGGTTCAAGACACCGGAAACATCATGATCATAATCCTTTTGCATTATCTTCCACAATTGACAGTAGTTCAAGTGAATATAGTTCACATACTGCTGGTACTTCAAGCAATATCTATGACACCAGGTCAACTGCAACCGCGACCACAGCCTTCACAGCTGCGACGGCTACCACTTCAGCATCCAGAGAGATAACGGCTACCACCTCAGCATCTAGAGAAATAACGGCTACCACCTCGGCATCCAGAGAAATAGATAAACATGGAAAACGTGTAATTGATGAGGGTTAG 1299 0.4373 MNKSKSFVQSIMKHLKFGSRRERQNEEDVQRIAAREQKVFSYETLVSATKNFNSRHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGKKEFINEAKLLARVQHRNVVNLLGYCAYGSEKLLVYEYVPHESLDKILFKSDRRKELDWPKRFGIIIGIARGLLYLHEDSHDCIIHRDIKASNVLLDDKWNPKIADFGMARLFPEDETHVKTRVAGTNGYMAPEYIMYGRLSTKADVFSFGVLMLEIISGQRNLSFNLDVDAQNLIDWAYKLYKKGRSLEIMDSAIAASAVPEQVAMCIQLGLLCIQGDPNARPTMHRVVVVLSKKPGHLEEPRKPGVPGSRHRKHHDHNPFALSSTIDSSSSEYSSHTAGTSSNIYDTRSTATATTAFTAATATTSASREITATTSASREITATTSASREIDKHGKRVIDEG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0153 432 CDD STKc_IRAK 58 324 - -
Mibi12g0153 432 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Mibi12g0153 432 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Mibi12g0153 432 MobiDBLite consensus disorder prediction 352 375 - -
Mibi12g0153 432 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0153 432 MobiDBLite consensus disorder prediction 325 375 - -
Mibi12g0153 432 SUPERFAMILY Protein kinase-like (PK-like) 37 341 IPR011009 -
Mibi12g0153 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Mibi12g0153 432 MobiDBLite consensus disorder prediction 393 432 - -
Mibi12g0153 432 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 368 - -
Mibi12g0153 432 Pfam Protein tyrosine and serine/threonine kinase 55 320 IPR001245 GO:0004672|GO:0006468
Mibi12g0153 432 MobiDBLite consensus disorder prediction 416 432 - -
Mibi12g0153 432 MobiDBLite consensus disorder prediction 393 415 - -
Mibi12g0153 432 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Mibi12g0153 432 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Mibi12g0153 432 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0153 Mibi-ChrMibi12 2880245 2884207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0153 40 336 Receptor kinase-like Gene Family AT4G11530 52.174 1.93e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi12g0153 PK_Tyr_Ser-Thr 3.2e-50 CL0016