Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0143 ATGATTAATATGGATCAGGGCTTTCTGGGAATCCTCAAACTTCGTTTAAAAAAAGGAATCAACCTTGCAGTACGCGACACTCGTACAAGTGATCCGTACGTTGTTATCACCATGCACGAACAGAAATTGAGGACTAAAGTTGTTAAAGACAACTGCAATCCGGAGTGGAACGATGAGCTGATGTTGTATGTAAAGAGAATCGATGCTCCAATCATTTTAAAAGTGTTTGACGAGGACAGGTTCAGGGAGGACTATCCAATGGGGGAAGCAAAGTTAGACATAAAGCCATTGTTGGAGTGTGCGAAGAAGATGAACATGAGGGTGAGGGAAGATCTGGAGGAAGGGTGTATGGTCAATATAGTTAAACCCAGCAGGTTTAACTGTCTCTCTGAAGATAGTTTGTGCACGTGGCATCAGGGCAAATTCCAACAAGAAATGTTACTAAGATTGAACAAAGTTGAGCGAGGTGAATTACTCATTGAAATCGAGTGGAATGATCAAGGTTGTCTAGGATTATCCAACGTTGACTTTTAA 534 0.4139 MINMDQGFLGILKLRLKKGINLAVRDTRTSDPYVVITMHEQKLRTKVVKDNCNPEWNDELMLYVKRIDAPIILKVFDEDRFREDYPMGEAKLDIKPLLECAKKMNMRVREDLEEGCMVNIVKPSRFNCLSEDSLCTWHQGKFQQEMLLRLNKVERGELLIEIEWNDQGCLGLSNVDF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0143 177 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 9 166 IPR044562 -
Mibi12g0143 177 Gene3D C2 domain 9 169 IPR035892 -
Mibi12g0143 177 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Mibi12g0143 177 Pfam C2 domain 10 99 IPR000008 -
Mibi12g0143 177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 165 IPR035892 -
Mibi12g0143 177 SMART C2_3c 11 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0143 Mibi-ChrMibi12 2767978 2769045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0143 8 164 C2H2 Transcription Factor Family AT4G21160 44.304 6.34e-38 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0143 12 2767978 2769045 Mibi12g0143 12 2767978 2769045 ECH
Mibi12g0143 12 2767978 2769045 Mibi08g1180 08 27031524 27035617 ECH