Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0117 ATGGTTAAGTCCTCCGATAATGGATTCGGTTCTGTGGCGCCTTTCCTGAAAAAATGTTATGAGATGGTGGATGATGATTCCACCGACTCCCTCATATCCTGGAGCGAAAGTAACGATAGTTTTATCATCTGGGATATGACTGAGTTCTCCGTGCGTTTGCTTCCCAAGTATTTCAAGCACAACAATTTCTCCAGTTTCATCAGGCAGCTTAATATTTATGGTTTCAGGAAAACTGATACAGATCGCTGGGAATTTTCCAATGATGACTTTATCAGAGGTCAAAAGCATTTACTAAAGAATATATTGCGGAGAAAACATCCAAATGTTTCAGATCAGCGAAAGCCATCTCAGCAGCAAGAGAATCATGATGTGCCTTCTCAAGAAGTTAAACACTACGACCTATGGAAAGAAGTCGAGAATTTGAAAACTGATAAAACTGCACTCACACAGGAGTTGGTTAAACTTAGGCAGCACCAGGAATCATCTAAGAACAAGATGCTGCTCCTGACCAATCGACTTCAAGGTATGGAAAAGAATCAGCAACAGATGTTATCATTCTTAGTTATGGCCATGCAAATTCCTGGGTTCATGGTTCAGCTGCTTCAGCCCAAGGAAAACGGTTGGCATACAACTGATACAAGCAATATGTTGGAACACAGTGCAGAAGATGTTCAACCAATTGCTTCTGATGGGATGATAATGAGGTATCAACCGCCCTTGAGGGAAAAAATGAAGCCTGGGGTCACACCATCTCGTGTTTCAGACAGACCACCAGAACCCAATCTCTGTACTGATGGGTTGAGAGATTATTTCATCAATTCTGACTTCTTGAAAGTGCTCATGGATGAAAAATTGTGTCAAATAGAAAATCATTCTCCATTAATTCTACCGGATGCACCCGACGATAATGCCTGGGAGCAGCTTCTTTTAGGCAGTCCCTTCACTGAAAATGAAGAGTCAAATCGGGAAAGTGACAAGCCTGCCAACAATGAAATGGAGATCGAGCCTGCTATAAGCGAAACTCTGTTTGATAAATTCCAAAATTGTGTCGAGTTGATTCCAGAAATGGACAAAACTCAGAAGAGTGGATTGGAAGTATCTGCTGATGGTGTTCATTTGGAGACTCTGCAGAGTTTGGAATCTCTAACCGAGCAAATAGAACTTCTGGCTTATGAATCAAATGAGACAGGGACATAA 1197 0.4152 MVKSSDNGFGSVAPFLKKCYEMVDDDSTDSLISWSESNDSFIIWDMTEFSVRLLPKYFKHNNFSSFIRQLNIYGFRKTDTDRWEFSNDDFIRGQKHLLKNILRRKHPNVSDQRKPSQQQENHDVPSQEVKHYDLWKEVENLKTDKTALTQELVKLRQHQESSKNKMLLLTNRLQGMEKNQQQMLSFLVMAMQIPGFMVQLLQPKENGWHTTDTSNMLEHSAEDVQPIASDGMIMRYQPPLREKMKPGVTPSRVSDRPPEPNLCTDGLRDYFINSDFLKVLMDEKLCQIENHSPLILPDAPDDNAWEQLLLGSPFTENEESNRESDKPANNEMEIEPAISETLFDKFQNCVELIPEMDKTQKSGLEVSADGVHLETLQSLESLTEQIELLAYESNETGT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0117 398 MobiDBLite consensus disorder prediction 312 331 - -
Mibi12g0117 398 FunFam Heat shock transcription factor 1 9 105 - -
Mibi12g0117 398 Gene3D - 9 105 IPR036388 -
Mibi12g0117 398 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 239 IPR027725 -
Mibi12g0117 398 Coils Coil 138 158 - -
Mibi12g0117 398 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi12g0117 398 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi12g0117 398 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi12g0117 398 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi12g0117 398 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi12g0117 398 MobiDBLite consensus disorder prediction 103 126 - -
Mibi12g0117 398 SUPERFAMILY "Winged helix" DNA-binding domain 11 104 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0117 Mibi-ChrMibi12 1775789 1779423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0117 1 395 HSF AT1G67970 46.420 1.02e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi12g0117 HSF_DNA-bind 4.8e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0117 12 1775789 1779423 Mibi12g0117 12 1775789 1779423 ECH