Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0115 ATGGCAGAAACATGCGGAAGCTGTAGATCTTGGGTCGATGACATTTACTGGTCCCATTTCAAATTCACCCATTTTGCTCTGCGTCTCCCTCCTGGTTTTCATCAACATCTTGCACTTCCCAAAAGGTTTTCAGATGGCTTGAAAAGGAAATTGCCGGATGATGCAACCCTTAAAGGTCCTGGTGGTGCTGAGTTGACTGTCAAATTGTCGACTAAAGATGATATATTGCACTTCACGCATGGTTGGCAACAATTTGCACAAGATCACTTTTTGGAAGAGAATGATCTCCTGATCTTCAAGTACAATGGTGAATCACAGTTTGATGTTTTGATATTTGACCAGAAGAACTTATGTGAGAAGGTAGCTTCATATTTTGTTCGGGACAGTGGGCAAGCGAATAATACAAACACAGATAACGGTATGCAAGAAGAAAATATCCCTTCTAATATCGATGTCAAAGTGGCTTCACCTAAGAAATCTGCACGTGGTAAGAGTAAAAAGACAAGTAAAAAGGCTCGTAAAGCTACTGTGGAAACCACCCCTGCCCAACCATCTAAGCGAAGGGGAAGATCTAGGGGATCCGATGCGCATACTGGAGAAATTGAATGGGTTCCTGATGCTGAACCTGCATCCGTAAGCAATAATAAGATAGTTGAAATAGTGGACGCTTCAAAACAAAGGGCTATCATAGAGAATGCGAAAAAGGATGCCCTCCAATTGGCTCAAGCAGCATGTCCTGCAGATGGATTCTATGTAGTCATGCGGCCCTCACATTTATATGGGAGGTTCTACATGACAATCCCTACGAAGTGGATGACAGAGCATTTGCCTCCACAATCTGAAGATGTGATATTACGTATGGGAGAGACTGAATGGCTTGCTAAATATGTCTTTGAACCCAGTCGTCGCTCCGGCGGACTCACCGGTGGGTGGAAACAATTTGTGATAGAAAATTTCATGCGAGAATTTGACGTTTGTGTGTTTAACCAAGCAAATTTAGGCAAGAAGCCACTGACCCTTGATGTCAAAATATTCAAAGTTGATGTGTAG 1050 0.4276 MAETCGSCRSWVDDIYWSHFKFTHFALRLPPGFHQHLALPKRFSDGLKRKLPDDATLKGPGGAELTVKLSTKDDILHFTHGWQQFAQDHFLEENDLLIFKYNGESQFDVLIFDQKNLCEKVASYFVRDSGQANNTNTDNGMQEENIPSNIDVKVASPKKSARGKSKKTSKKARKATVETTPAQPSKRRGRSRGSDAHTGEIEWVPDAEPASVSNNKIVEIVDASKQRAIIENAKKDALQLAQAACPADGFYVVMRPSHLYGRFYMTIPTKWMTEHLPPQSEDVILRMGETEWLAKYVFEPSRRSGGLTGGWKQFVIENFMREFDVCVFNQANLGKKPLTLDVKIFKVDV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0115 349 Gene3D - 228 348 IPR015300 -
Mibi12g0115 349 ProSiteProfiles B3 DNA-binding domain profile. 22 115 IPR003340 GO:0003677
Mibi12g0115 349 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 33 348 IPR044837 -
Mibi12g0115 349 ProSiteProfiles B3 DNA-binding domain profile. 250 348 IPR003340 GO:0003677
Mibi12g0115 349 SUPERFAMILY DNA-binding pseudobarrel domain 250 338 IPR015300 -
Mibi12g0115 349 Gene3D - 18 118 IPR015300 -
Mibi12g0115 349 MobiDBLite consensus disorder prediction 188 202 - -
Mibi12g0115 349 CDD B3_DNA 32 113 IPR003340 GO:0003677
Mibi12g0115 349 MobiDBLite consensus disorder prediction 130 205 - -
Mibi12g0115 349 MobiDBLite consensus disorder prediction 130 146 - -
Mibi12g0115 349 SMART B3_2 250 348 IPR003340 GO:0003677
Mibi12g0115 349 SMART B3_2 24 115 IPR003340 GO:0003677
Mibi12g0115 349 Pfam B3 DNA binding domain 34 114 IPR003340 GO:0003677
Mibi12g0115 349 Pfam B3 DNA binding domain 250 345 IPR003340 GO:0003677
Mibi12g0115 349 CDD B3_DNA 250 346 IPR003340 GO:0003677
Mibi12g0115 349 SUPERFAMILY DNA-binding pseudobarrel domain 20 114 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0115 Mibi-ChrMibi12 1763390 1766879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0115 1 346 REM Transcription Factor Family AT4G33280 33.854 1.39e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi12g0115 B3 1e-10 CL0405