Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0104 ATGGAGAAACCCCAACTTGGTTTTGGGGTTTCTTTTGTAGTTTATCGTCTTATTTTGGTGTTGTCTGTGGCCATTTTGGCTTTGTCTCAAAATGATGTAGAGGTTATGAACATTCTTAAGGAGGCAATCAATGCCCCACCTAGCCTCAAATGGACAGACCCTGATGTTTGCAAATGGCAGCATGTGGATTGCAACACTGAAAAACGTGTCATTTCAATCCAGATTGGTAATTTGAATTTGCAAGGTTTGCTTCCGAAAGAACTTGAGACTCTCTCAGAGTTGCAACATTTTGATTGCCCACAGAATGACTTCACAGGTCCAGTTCCATATCTATCTAAGACATTGCAAAGACTTGTGATTCGTGATAACAAGTTCAGCTCCATCCCTAATGATTTCTTCAAGGACATGACAATGTTACAAGAAGTTCGAATTGGAAATAACCCATTTTCGCCATGGTCTGTCCCAGATAGTCTTAAGGATTGTGTATCACTTCAAACATTTGTGGCAACAAATGCAAGTTTGGTTGGAACGATCCCAGATTTTCTAGGAACTTTGCCAGGTTTAGTTTCTTTGCTCCTGAATTCTAATAGTCTTGAAGGTGGTTTGCCTACCAGCTTTGCAAAAAGTTCAATCCAGGAACTTTGGTTGAATAGTCAAAATGGTAACTATAAACTTAATGGCACAATTAAGGTGCTGCAGAACATGACATCCTTAAAACAAGTTTGGCTCCATAGTAATTCATTTACAGGTTCAATACCAGACTTGTCAAACCATGATCAGTTGTTTGATGTGAGTGTAAGGGACAACCAATTGGCTTGTGCTGTCCCATCATCTCTTATTGCTCTTCCAAGTTTACAAGTTGTGAATTTGACTAACAATTTCCTTCAAGGGCCTCTTCCAACATTTAAATCAGATGTAGCTGTTGATATGTCTGGGATTAATCGGTTTTGCACGAACGTTCCAAATCAACCATGTAGTCCTCTTGTGAATGTTTTGCTCTCTATTGTTGAATCCTTAGAATGTCCTGTGAAATTGGCAAATAATTGGAAGGGCAATGATCCCTGTAATGGCAGTTGGACAGGAATAGTATGTGCTAGTGGTAACATTTCAATTATCAATTTTCAGAACATGGGCTTGTCGGGCACTATTTCTCCTAATTTTGCCTCACTTACTTCTGTCACAGAATTACTTCTTTCTGATAATTCACTCACAGTATGCAGCAACTGGGCGACTTCTTTTTCACATGGAGATCTGGTTAATCGCAAAGAAACTCGCAATGCGTTCTGGGCTCTGGCTAATGATAATATGGCTATGTTTTGGCTTTGCTCATTAAATTACCTAGGAAATAACATGGGAAAACCCCATCTTGATTTTGGGGTTTCTTTCATAATTTGTCGTCTTGTTTTGGTACTACTATCACTGGTGATTCCAGCTTTGTCTCATAATGATGAGGAGGTTATGAACATTCTTAAGAAGGCTATCAATGCCCCACCTAGTCTTAGATGGACAATCCCTGATGTTTGCAAATGGAGAGGTGTGGATTGTAATGCTGGAAGAAGGGTAATTTCCATACAGATTGGGAACTTGAATTTGCAAGGTTTGCTTCCAGAAGAACTTGAGAATCTCTCTGAGTTGCAGCGATTTGAATGCCCACAGAACAATCTGACTGGTCAAGTTCCATATATGTCCAACACATTGCAAAGACTTGTGATCCGGGATAACAAGTTTAGCTCCATCCCCAATGATTTCTTCAAAGGAATGACAATGTTACAAGAAGTAAGTATTGGGAATAACCCATTTTTGCCATGGTACATTCCAAATAGTCTTGAGGATTGTGTAGCACTCCAGACATTTGTGGCAACCAATGCAAGTTTTGTTGGGACGATCCCAGATTTTTTGGGTGCTATGCCAGGTTTAGTTTCTTTAGTCTTGAGTTATAATAGTCTTGAAGGTGGGTTGCCTTCCAATTTTGGTAATAGTTCAATCGAGGAACTTCTGTTGAACACACAGAATGGTAACTATAAACTCAATGGCACAATTGAGGTGCTGCAGAACATGACATCCTTAAAAAAAGTTTGGCTACATAGTAATTCATTTACAGGTCCAATACCAGAATTTTCAAACCATGATCAGCTGTCTGATGTGAGTTTGAGGGACAATCAATTGGCTTGTTCTGTCCCATCATCTCTTATGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACTAACAATTTCCTTCAAGGGCCCATTCCATTGTTCAGATCAGGTGTGGTTGTTGATGTGTTTGGAATTAATCGGTTTTGTTCAAACATCCCAAATCAGCCATGTAGTCCTCTTGTGAATGCTTTACTCTCTGTTGTTGAACCCTTAGGATGTCCTGTGAAATTGGCTGATAAATGGAAGGGCAATGATCCTTGCAATGGTAGTTGGACAGGAATAGTGTGTTCTGGGGGGGACATTTCAATTGTTAATTTTCAAGATATGGGATTGTCAGGCACGATTTCACCGACTTTTGCCTCACTTACCTCTCTGTCAAAAATGCTTCTTGCCAATAATTCACTCACGGGTTCTATACCAAATGAGCTCACTACCATGCCCAATCTACGAGAGCTAGATGTTTCTAATAACAATTTAGGAGGTTATGTACCATCTTTTCCTAAAAAAAGTATGATTATTAGAAAAGATGGGAATCCTAATCTTGGAAAACCTATTGAATCACCCAGCTCAAATTATGGAGGTAATGGTATTAAGAAAAAAGACCAACTTTCTTTATTCATCGCGGGCATTGGGGTTGGCTTACTGATTTTACTCCTTCTAGTAGTGATAATGTCTTACATGTGTCTTAAAAAACGTAATTATTATCGCAAGTTTGGAGGTCTAATAGCGAAGTTGATAGATCCTCATGATGGTGATGAAGTTGGAAAAGGTACGAAGATTTACGTTGAAGGTGCTGGTGCTCCAGGTCAAGCTGATGTCCAAGGAAGAAATTCAATTGAAACTAAGCTTGCTGGAACTTTTGGGTATCTTGCACCTGAGTATGCAGTGACCGGGCGTTTTACTACAAAGGTTGATGTGTATAGCTTCGGAGTAGTTCTAATGGAAATGATAACGGGGAGGAAAGTGCTCGACAATAGTCTACCAGAGGAAGACTTCCACCTGGTAATGTGGTTCCGACGAATGATGCAGGACAACGATTCGTTCCGTAAGGTAATTGATCCTATCATTAATGTAGATGATGAAGCAACCATGTGCAGCATCAGGACTGCCTCAGAATTGGCTGGCCATTGTTGTGCAAGTGATCCTCATCAACGTCCTCACATGGGTTACGTCGTGAATGTACTATCGCCTCTAGTTCAAGCAGCATGGAAGCCAATCATGGAGTCTAGTTCTGAAGATGATGGAAAAAAGTATGGCATCGATTTTAATATGAGTTTGCCTCAAGCACTTAGAAAGTGGCAATCTTTGGAAGGACAAAGCAACAGTTCTATATTGGTCAAAGGATCTTCTTCTCAATCATTTGTTACAAAATAA 3531 0.3988 MEKPQLGFGVSFVVYRLILVLSVAILALSQNDVEVMNILKEAINAPPSLKWTDPDVCKWQHVDCNTEKRVISIQIGNLNLQGLLPKELETLSELQHFDCPQNDFTGPVPYLSKTLQRLVIRDNKFSSIPNDFFKDMTMLQEVRIGNNPFSPWSVPDSLKDCVSLQTFVATNASLVGTIPDFLGTLPGLVSLLLNSNSLEGGLPTSFAKSSIQELWLNSQNGNYKLNGTIKVLQNMTSLKQVWLHSNSFTGSIPDLSNHDQLFDVSVRDNQLACAVPSSLIALPSLQVVNLTNNFLQGPLPTFKSDVAVDMSGINRFCTNVPNQPCSPLVNVLLSIVESLECPVKLANNWKGNDPCNGSWTGIVCASGNISIINFQNMGLSGTISPNFASLTSVTELLLSDNSLTVCSNWATSFSHGDLVNRKETRNAFWALANDNMAMFWLCSLNYLGNNMGKPHLDFGVSFIICRLVLVLLSLVIPALSHNDEEVMNILKKAINAPPSLRWTIPDVCKWRGVDCNAGRRVISIQIGNLNLQGLLPEELENLSELQRFECPQNNLTGQVPYMSNTLQRLVIRDNKFSSIPNDFFKGMTMLQEVSIGNNPFLPWYIPNSLEDCVALQTFVATNASFVGTIPDFLGAMPGLVSLVLSYNSLEGGLPSNFGNSSIEELLLNTQNGNYKLNGTIEVLQNMTSLKKVWLHSNSFTGPIPEFSNHDQLSDVSLRDNQLACSVPSSLMALPSLQVVNLTNNFLQGPIPLFRSGVVVDVFGINRFCSNIPNQPCSPLVNALLSVVEPLGCPVKLADKWKGNDPCNGSWTGIVCSGGDISIVNFQDMGLSGTISPTFASLTSLSKMLLANNSLTGSIPNELTTMPNLRELDVSNNNLGGYVPSFPKKSMIIRKDGNPNLGKPIESPSSNYGGNGIKKKDQLSLFIAGIGVGLLILLLLVVIMSYMCLKKRNYYRKFGGLIAKLIDPHDGDEVGKGTKIYVEGAGAPGQADVQGRNSIETKLAGTFGYLAPEYAVTGRFTTKVDVYSFGVVLMEMITGRKVLDNSLPEEDFHLVMWFRRMMQDNDSFRKVIDPIINVDDEATMCSIRTASELAGHCCASDPHQRPHMGYVVNVLSPLVQAAWKPIMESSSEDDGKKYGIDFNMSLPQALRKWQSLEGQSNSSILVKGSSSQSFVTK 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0104 1176 SMART LRR_typ_2 865 888 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 636 659 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 235 258 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 185 208 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 390 415 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 562 586 IPR003591 -
Mibi12g0104 1176 SMART LRR_typ_2 111 135 IPR003591 -
Mibi12g0104 1176 SUPERFAMILY L domain-like 34 302 - -
Mibi12g0104 1176 FunFam Receptor-like kinase TMK4 30 322 - -
Mibi12g0104 1176 ProSiteProfiles Protein kinase domain profile. 820 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0104 1176 SUPERFAMILY L domain-like 329 406 - -
Mibi12g0104 1176 Pfam Protein kinase domain 999 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0104 1176 Pfam Leucine Rich Repeat 867 885 IPR001611 GO:0005515
Mibi12g0104 1176 FunFam Leucine-rich repeat receptor-like kinase 327 411 - -
Mibi12g0104 1176 Pfam Leucine rich repeat N-terminal domain 331 364 IPR013210 -
Mibi12g0104 1176 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Mibi12g0104 1176 Pfam Leucine rich repeat N-terminal domain 799 816 IPR013210 -
Mibi12g0104 1176 Pfam Leucine rich repeat N-terminal domain 483 516 IPR013210 -
Mibi12g0104 1176 Gene3D Transferase(Phosphotransferase) domain 1 961 1136 - -
Mibi12g0104 1176 PANTHER OSJNBA0070M12.3 PROTEIN 467 981 - -
Mibi12g0104 1176 FunFam Receptor-like kinase TMK4 481 773 - -
Mibi12g0104 1176 FunFam Leucine-rich repeat receptor-like kinase 778 903 - -
Mibi12g0104 1176 SUPERFAMILY L domain-like 485 886 - -
Mibi12g0104 1176 Gene3D Ribonuclease Inhibitor 29 322 IPR032675 -
Mibi12g0104 1176 Gene3D Ribonuclease Inhibitor 480 766 IPR032675 -
Mibi12g0104 1176 Gene3D Ribonuclease Inhibitor 779 903 IPR032675 -
Mibi12g0104 1176 Gene3D Ribonuclease Inhibitor 328 418 IPR032675 -
Mibi12g0104 1176 SUPERFAMILY Protein kinase-like (PK-like) 995 1120 IPR011009 -
Mibi12g0104 1176 MobiDBLite consensus disorder prediction 1157 1176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0104 Mibi-ChrMibi12 1609613 1618963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0104 144 928 Receptor kinase-like Gene Family AT5G46330 26.260 1.25e-30 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mibi12g0104 Pkinase 1.8e-10 CL0016