Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0103 ATGTATTGCCGCTCCAAAACCCTAGTCTCTGCGCCTGACTGTCTCTACGTTTGTACGGACTCGATGGGTGAGGAGGTGAAGGCTATCGTTCCAGAGTCTGTCTTGAAGAAGCAGAAGAGGGAGGAGGAATGGGCACTGGCCAAAAGTCAGGAACTTCAAGCTGCTAAGAAGAAGAGAGCAGAGAGCCGTAAGCTGAGTTTCAATAGAGCTAAGCTGTACTCGAATGAGTACGAGGAACAAGAGAAGGAATTAATTAGATTGAAACGTGAGGCAAAGCTTAAGGGTGGATTTTATGTTGATCCAGAAGCAAAACTTCTATTTATTATTCGCATTCGTGGTATTAATGCCATGCATCCAAAGACTAGGAAGATCTTGCAGCTCTTGCGTTTGAGACAGATCTTCAACGGTGTATTCCTTAAGGTTAACAAAGCCACAATGAACATGCTGCACAGAGTCGAACCTTATGTGACTTATGGATACCCAAATCTTAAGAGTGTCAGAGAACTTATTTACAAGAGGGGTTATGGTAAGGTCGACAGGCAGAGAATTGCTTTAACTGACAACTCCATCATTGAGCAGGTACTGGGCAAGCATGGAATCATTTGCATTGAGGATCTTATCCATGAGATCATAACAGTTGGGCCCCACTTTAAGGAGGCCAACAACTTCCTCTGGCCATTTAAGCTAAAGGCTCCTTTGGGTGGACTGAAGAAGAAGAGAAATCACTATGTTGAAGGAGGCGATGCTGGAAACAGAGAGAATTACATTAATGAGCTCATCAGAAGAATGAACTAG 795 0.4377 MYCRSKTLVSAPDCLYVCTDSMGEEVKAIVPESVLKKQKREEEWALAKSQELQAAKKKRAESRKLSFNRAKLYSNEYEEQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGIICIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0103 264 CDD Ribosomal_L7_archeal_euk 105 264 IPR035808 -
Mibi12g0103 264 ProSitePatterns Ribosomal protein L30 signature. 124 156 IPR018038 -
Mibi12g0103 264 Gene3D - 105 208 IPR036919 -
Mibi12g0103 264 Gene3D - 209 264 IPR036919 -
Mibi12g0103 264 SUPERFAMILY Ribosomal protein L30p/L7e 105 264 IPR036919 -
Mibi12g0103 264 FunFam 60S ribosomal protein L7 105 209 - -
Mibi12g0103 264 PANTHER 60S RIBOSOMAL PROTEIN L7 28 264 IPR039699 -
Mibi12g0103 264 Coils Coil 70 94 - -
Mibi12g0103 264 Pfam Ribosomal protein L30p/L7e 106 156 IPR016082 -
Mibi12g0103 264 TIGRFAM uL30_euk: 60S ribosomal protein uL30 31 264 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mibi12g0103 264 Pfam Ribosomal L30 N-terminal domain 30 101 IPR012988 -
Mibi12g0103 264 FunFam 60S ribosomal protein L7 210 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0103 Mibi-ChrMibi12 1604518 1606765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0103 25 264 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.000 2.44e-154 428