Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0090 ATGGCTTCTTCCAAGGCGTTAATGGCTTCCTTAACCCACCTTCGTCCTCTAACATGCGCCGCTTCTTCTTCTTCTTATCCTACACGCCTTGTGCCCCAACCTCCCGACCTCATCAAATGGGTTCGTACACAAGGTGGTTTCGTCCACAAGGCTGTCAACATATCTCAACATGGCCCCAATGGCCTCGGCCTCGGCCTCATGGCTTCCCAAGAAATCCCTTGTGGCAGCGACCTTATTGTTCTTCCGCATCACGTGCCCTTAAAGTTTGGGTCTTTTGAATCGAACCGTGAAGATGAGACTGATTCTGTGTTGGTTAATTTAGCCCGCCATGTTCCTGAGGAACTATGGGCTATGAAACTGGGTTTGAAGCTTCTGCAAGAAAGAGCAAAAGTAGGATCGTTTTGGTGGCCATACATCAGCAATCTCCCAGAAACATATAGTGTGCCTATCTTCTTTCCAGGGGAGGATATAAAGAACTTGCAGTATGCTCCACTGCTTCACCAGGTAAACAAAAGATGTCGTTTCCTTCTTGATTTTGAACAAGGGTGCAGGCGTGCCCTTGACAATCTGAAACCAGATGAACATCCTTTTGGTGGACTAGAAATAGATGCATCTGCACTTGGATGGGCAATGTCAGCAGTTTTATCTAGGGCATTCCGGTTGTATGGTGACAAGCGTCCGGATGGGACCCACACAGACATACCAATGATGCTTCCTCTAATCGATATGTGCAACCATAGTTTCAATCCGAATGCCCGCATTGTTCAGGAAAAAGATACTGGTACAATGAATATGCAAGTAAAGGTCGTGACTGATACAGAGATCAAACAAGATGATCCCTTACTACTCAATTACGGCCTTTTGAGCAATGATTTTTTCCTTCTTGATTATGGCTTTGTGATACCCTCAAATCCTTATGACTATATTGAGCTCAAATATGATGTTGCATTTTTGGATGCTGCAAGCATGGCAGCTGGGATTTTTTCTCCCTACTTCTCGGCACCTGCTTCATGGCAGGAACAAGTTTTATGTCAACTAAATCTATCTGGAGAAGCTCCTGATCTCAAGGTAAGCTTAGGTGGTCCAGAAATAGTAGATGGCCGCCTATTGGCAGCACTGAGAGTACTTCTTGCGAGTGACGTGGAGGCTGTGCAGAACTGTGACCTTAACACTCTCAAGTCTTTAGATGCTGAGGCTCCTCTTGGCATTGCAAATGAAGTGGCAACCCTGCGAACAACAATTGCTTTGTGTGTGATTGCATTGGGGCACTTCCCCACCAAGATAATAGATGATGAGTCATTGTTGAAACAAGGAGCTTCTGGTTCAACTGAGCTTGCTATTCAGTTCAGGATTCAAAAGAAGTCTGTGATTATTGATGTGATGAGAGACCTGACGAGGAGGGTGAAACTTCTCTCATCAAAGGAAAACGCCACTGCTGAAAGTTGA 1446 0.4537 MASSKALMASLTHLRPLTCAASSSSYPTRLVPQPPDLIKWVRTQGGFVHKAVNISQHGPNGLGLGLMASQEIPCGSDLIVLPHHVPLKFGSFESNREDETDSVLVNLARHVPEELWAMKLGLKLLQERAKVGSFWWPYISNLPETYSVPIFFPGEDIKNLQYAPLLHQVNKRCRFLLDFEQGCRRALDNLKPDEHPFGGLEIDASALGWAMSAVLSRAFRLYGDKRPDGTHTDIPMMLPLIDMCNHSFNPNARIVQEKDTGTMNMQVKVVTDTEIKQDDPLLLNYGLLSNDFFLLDYGFVIPSNPYDYIELKYDVAFLDAASMAAGIFSPYFSAPASWQEQVLCQLNLSGEAPDLKVSLGGPEIVDGRLLAALRVLLASDVEAVQNCDLNTLKSLDAEAPLGIANEVATLRTTIALCVIALGHFPTKIIDDESLLKQGASGSTELAIQFRIQKKSVIIDVMRDLTRRVKLLSSKENATAES 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0090 481 Pfam Rubisco LSMT substrate-binding 336 456 IPR015353 -
Mibi12g0090 481 Gene3D set domain protein methyltransferase, domain 1 5 299 - -
Mibi12g0090 481 Pfam SET domain 63 286 IPR001214 GO:0005515
Mibi12g0090 481 CDD SET_LSMT 63 300 - -
Mibi12g0090 481 Gene3D - 330 479 IPR036464 -
Mibi12g0090 481 ProSiteProfiles SET domain profile. 50 286 IPR001214 GO:0005515
Mibi12g0090 481 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 21 443 - -
Mibi12g0090 481 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 296 476 IPR036464 -
Mibi12g0090 481 FunFam Histone-lysine N-methyltransferase setd3 3 299 - -
Mibi12g0090 481 SMART set_7 50 292 IPR001214 GO:0005515
Mibi12g0090 481 SUPERFAMILY SET domain 32 304 IPR046341 -
Mibi12g0090 481 FunFam SET domain containing protein 322 475 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi12g0090 SET 2.9e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0090 12 1474832 1478900 Mibi12g0090 12 1474832 1478900 ECH