Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0071 ATGAAGGGCCACGAGAGGCCACTGACGTTCCTCAAGTACAACAGGGATGGCGATCTCCTTTTCTCTTGCGCCAAGGATCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCTTGGGCACTTATCGTGGTCACAACGGCGCCGTTTGGTCCTGTGATGTCTCAAGGGATTCAATGCGGCTTCTTACGGGAAGTGCAGATCAGACGGCGAAGCTTTGGAATGTTCAGACTGGGCAGCAGTTGTTCACGTTCAATTTTGATTCTCCTGCTAGGTCTGTGGATTTTGCTGTGGGTGACAAGCTTGCTGTTATTACTACTGATCCCTTCATGGAATTGTCTTCTGCCATTCATGTCAAACGCATTGCTAGAGACATCACTGACCAGACTGGTGATTCTGTACATGTCATTAAAGGTCCTCAGGGAAGAATAAATAGAGCCATTTGGGGGCCACTAAACAAAACCATTATTAGTGCTGGAGAAGATGCAGTGATCCGTATATGGGATTCTGAGACAGGAAAGCTACTTAAGGAGGCAGACAAGGAATCTGGTCATAAAAAGACAATAACATCTCTTGCAAAATCTGCAGATGGTTCCCATTTCCTGACTGGTTCCCTTGATAAATCGGCTAAGCTTTGGGATGCCAGATCATTGACTCTTATCAAGACGTATGTAACAGAACGCCCAGTTAATGCTGTGGCCATGTCACCTCTTCTTGACCATGTTGTGCTTGGAGGTGGTCAAGACGCATCAGCTGTTACTACTACTGATCATCGTGCTGGAAAATTTGAAGCCAAGTTTTTTGATAAGATTCTTCAAGAAGAGATTGGGGGTGTGAAGGGACATTTTGGACCAATTAACGCACTTGCCTTTAACCCCGATGGCAAGAGCTTTTCAAGTGGAGGTGAAGATGGTTACGTAAGGTTGCATCATTTTGATCCAGATTACTTCAATATTAAAATTTAG 966 0.4565 MKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWSCDVSRDSMRLLTGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELSSAIHVKRIARDITDQTGDSVHVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKEADKESGHKKTITSLAKSADGSHFLTGSLDKSAKLWDARSLTLIKTYVTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0071 321 SUPERFAMILY WD40 repeat-like 2 309 IPR036322 GO:0005515
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats profile. 43 84 IPR001680 GO:0005515
Mibi12g0071 321 ProSitePatterns Trp-Asp (WD) repeats signature. 156 170 IPR019775 -
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 182 217 - -
Mibi12g0071 321 CDD WD40 2 309 - -
Mibi12g0071 321 Pfam WD domain, G-beta repeat 278 309 IPR001680 GO:0005515
Mibi12g0071 321 Pfam WD domain, G-beta repeat 38 75 IPR001680 GO:0005515
Mibi12g0071 321 Pfam WD domain, G-beta repeat 132 169 IPR001680 GO:0005515
Mibi12g0071 321 Pfam WD domain, G-beta repeat 183 214 IPR001680 GO:0005515
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 309 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 172 214 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 217 256 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 1 33 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 272 311 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 36 75 IPR001680 GO:0005515
Mibi12g0071 321 SMART WD40_4 130 169 IPR001680 GO:0005515
Mibi12g0071 321 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 1 321 IPR027525 GO:0003743|GO:0005737|GO:0005852
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 309 - -
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats profile. 182 223 IPR001680 GO:0005515
Mibi12g0071 321 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 320 - -
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 43 80 - -
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 42 IPR001680 GO:0005515
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 137 174 - -
Mibi12g0071 321 ProSitePatterns Trp-Asp (WD) repeats signature. 62 76 IPR019775 -
Mibi12g0071 321 Gene3D - 1 321 IPR015943 GO:0005515
Mibi12g0071 321 PRINTS G protein beta WD-40 repeat signature 62 76 IPR020472 -
Mibi12g0071 321 PRINTS G protein beta WD-40 repeat signature 156 170 IPR020472 -
Mibi12g0071 321 PRINTS G protein beta WD-40 repeat signature 201 215 IPR020472 -
Mibi12g0071 321 ProSiteProfiles Trp-Asp (WD) repeats profile. 137 178 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0071 Mibi-ChrMibi12 1258414 1261170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0071 1 321 Eukaryotic Initiation Factors Gene Family AT2G46290 80.805 0.0 548