Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0070 ATGGACCCCGATTTACGTCGCTGGATACTTGAATTTCTCCTTATGAGTTCCGCTCCAGATTCAATCATCAAGGATGTTTGGAACGCTTTGCCTATCACTGGTACCGATTCTCGGCTGGCCAAAATATTGGCCCTCAGGTCTATTCAATCGGAGGTTACTGCGGCATCAATCACTGAAATCTCACTGGAATGTCTAGAGATTATTGAAGAAATCGACAATCTTCATGGCATTTCTGTCACACAAGCCATGAAGGAAGCATATTGTGCCGTCGCCGTTGAGTGTACTGTCAAATACATTGATGCACACCCAGATAAGAACAGGCACGGCTTGTTTCACGATTCTGTCAATAGGATTTGGAGGGATCGGTTTCTGAAAATGGTCTCGGCGTTAGGGAGTAAAAGTCAGTTATTTACGGCTGAGTTGGTAAGGTGGAAGGATGACCTTGAATCTGCACGTTGGGATGCAAAGATGTGTGAAAGGTTGCTGAACATGAATACCAGAGAAGTTGCATTGGATAAAGTTAAGGTCTTTCTGAAAGAAACTTGGGCATCTATGGGCCCTTCTTTTCTTGAGGTAGCAGCTTCTGAAGGTGAGGGATTGGCAAGTTCTTCAAGGGGGGATAAGAGTAGAATACCCAATGAAGGTTGTGGCAAGAGTGTTTCTGAATCTGCCTTGGTCTTTGATGAGATGAATTTGTGTAAAGGAAGGTTACATTGTTCAAATAACATGACTGATGAGGGTTTTGTTGTGCCTGATGGAAGTGCATTGCATGATGGTGCAGTCTGCATGGAGAAGGCGACAGTGGCAGGTGGGAATGAAGATGGTGAGCACTTGGGAAACAGAGTGGTGTCTTCTGTTGGTGGAATTGAGGCATTGGATGGGACTGACTTGCCTCAAAAGATTGATAGAGCTATTCAAAAGGGCAAGCAGCCACTTGAACATAATCATGCTGTGCCCTCTACGCGTACACGTAGAGGAGTTAAAATTATTGATGCTGAGGAAGTAGGACCAGCAACAGTTTGTAGCAATGATCATAATCAATCTAATGTTCAAGTTGAACAACCTCAGAAATCTCTCAGGTCAAGTTCTTTGGAGTTGCAAGCATCGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCGGACATTGTGAGATCTGAATTAGCAACAAAGGGTGTGAATCGTGAGCCTCCTTTTGAAAACCAGAGTACTGTTGTAAATGTACCAGAACAAAATACTTGCCAGAGCACTGTGCCTTATCAACCTATCGATGATAACTTAATGAAACAGTCTTCTGCTAGATGCGGCAATGCTAGACGTCCCCATCCCCGCTGGATGGAACGGAATAGCACTGCCCATACTTATGAGTGTGATGATACATTTGCTGACTTGCCTGGGGGAAGTTCTAACAAAAGAAGGAGAAAGGTAAAATGGAGTTCTGAAGAAGAGGATGCATTAAGGGATGGTGTAAAGAAGTATGGCACAGGAAACTGGAAGTTAATCCTAAAATATTATGGTGAGATATTTGAAAAGTCAGGAAGAACAGAAGTTCATTTGAAAGATAAATGGAGAAATTTGACACGGTGGTCATAG 1593 0.4325 MDPDLRRWILEFLLMSSAPDSIIKDVWNALPITGTDSRLAKILALRSIQSEVTAASITEISLECLEIIEEIDNLHGISVTQAMKEAYCAVAVECTVKYIDAHPDKNRHGLFHDSVNRIWRDRFLKMVSALGSKSQLFTAELVRWKDDLESARWDAKMCERLLNMNTREVALDKVKVFLKETWASMGPSFLEVAASEGEGLASSSRGDKSRIPNEGCGKSVSESALVFDEMNLCKGRLHCSNNMTDEGFVVPDGSALHDGAVCMEKATVAGGNEDGEHLGNRVVSSVGGIEALDGTDLPQKIDRAIQKGKQPLEHNHAVPSTRTRRGVKIIDAEEVGPATVCSNDHNQSNVQVEQPQKSLRSSSLELQASVKDPLPDALHKSDIVRSELATKGVNREPPFENQSTVVNVPEQNTCQSTVPYQPIDDNLMKQSSARCGNARRPHPRWMERNSTAHTYECDDTFADLPGGSSNKRRRKVKWSSEEEDALRDGVKKYGTGNWKLILKYYGEIFEKSGRTEVHLKDKWRNLTRWS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0070 530 SUPERFAMILY Homeodomain-like 477 529 IPR009057 -
Mibi12g0070 530 ProSiteProfiles Myb-like domain profile. 470 527 IPR001005 -
Mibi12g0070 530 Pfam Myb-like DNA-binding domain 475 526 IPR001005 -
Mibi12g0070 530 SMART sant 474 529 IPR001005 -
Mibi12g0070 530 PANTHER MYB TRANSCRIPTION FACTOR 1 528 - -
Mibi12g0070 530 CDD SANT_TRF 476 528 - -
Mibi12g0070 530 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 470 530 IPR017930 -
Mibi12g0070 530 Gene3D - 467 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0070 Mibi-ChrMibi12 1251641 1255101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0070 478 526 Single Myb Histone (SMH) Gene Family AT1G15720 57.143 1.95e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi12g0070 Myb_DNA-binding 2.4e-12 CL0123