Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0063 ATGCACTTCGCCATGACTCTCCCAAAACCAATGGTACGATCTGATATGTCCTCCTTTCACCCTACTTTTGCTTCTTCTCGCTTTTCAACGAAATCTCTTCCAAGATTGAGCATGCCGGAGAAAGCGATGCCGAAGGAGGTGGCGTACCAGAAAATTCATGATGAGCTGCAAATGGACTGTAATCCAAAGCTGAACTTGGCGTCGTTTGTGACAACTTCCATGGAGGAAGAATGTAACGAGCTCATCATGGAATCCATTAACAAGAACTATGTTGACATGCATGAGTACCCCATCACCACTGACCTTCACAATCGGTGCGTGAACATGCTGGCAGGGTTGTTCAATGCTCCCATGGAAGAAGGTGAATGTGGCGTGGGTGTGGGAACAGTTGGATCATCTGAAGCAATAATGCTGGCTGGGCTGGCATTCAAGAAGAAATGGCAAAACATGAGGAAGGCTCAAGGCAAACCTTTCGACAAACCTAACATTGTAGTAGGCTCAAATGTTCAGGTGTGTTGGAAGAAATTTGCGAGGTATTTTGAGGTGGAGTTGAAGGAAGTGAAGATGAGAGAAGGGTGTTACGTGATGGAGCCAGAAAGAGCAGTGGAAATGGTGGACGAAAACACAATATGTGTAGCAGCAATTCTGGGTTCTACATACAATGGAGAATTTGAAGACGTGAAGCTCTTGAACGACCTTCTTCTCAGAAAGAACAAGCAAAGTGGGTGGGAGACGCCTATTCATGTGGATGCAGCAAGTGGAGGGTTTATTGCTCCATTTTTGTATCCAGAGTTGGAGTGGGATTTCAGGCTGCCATTGGTGAAGAGTATAAATGTGAGTGGGCATAAGTACGGATTGGTTTATGCAGGCATTGGTTGGGTTCTTTGGAGGACTAAACAAGACTTGCCTCAAGACCTTGTCTTCCACATCAATTATCTTGGAGCTGATCAGCCCACTTTCACCCTCAATTTCTCCAAAGGTTCTAGTCCGATTATAGCCCAGTATTATCAGCTAATTCGCTTGGGTAAAAAGGGCTACGGTAATGTGATGGAGAACTGTAGAGAGAATGCAATGGTTGTAAAGGAAGGAATAATAAACACAGGATGCTTCAACATAGTCTCCAAGGACGATGGCGTTCCCATGGTGGCATTCTCCCTCAGAGACAGAAGCCGGTACGACGAGTTCATGATCTCGGCCATGCTCCGGCACCACGGGTGGGTCGTGCCGGCGTACCCGATGCCACCTGGTGCCGACCACATCACCGTGCTACGTGTCGTCATAAGGGCCGACCTCTCTCGCACATTGGCTGAACGCCTTGTGCTAGACATCACAAATGTGCTGCATCAACTTGAAATGCTTCCTCAATACATTAATGAGGAGGATGATCATATGGCAACTATGAATGATCACAACAACAACAACAATAATATTGAAGGAGTGAATAGGACTTTTTTTGATGTCCAAAGAGAAATTCTTGCTCAAGAAGCCAACAAGCGCCAAAAAGTTTTGGCAGCATAG 1518 0.4605 MHFAMTLPKPMVRSDMSSFHPTFASSRFSTKSLPRLSMPEKAMPKEVAYQKIHDELQMDCNPKLNLASFVTTSMEEECNELIMESINKNYVDMHEYPITTDLHNRCVNMLAGLFNAPMEEGECGVGVGTVGSSEAIMLAGLAFKKKWQNMRKAQGKPFDKPNIVVGSNVQVCWKKFARYFEVELKEVKMREGCYVMEPERAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLRKNKQSGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKQDLPQDLVFHINYLGADQPTFTLNFSKGSSPIIAQYYQLIRLGKKGYGNVMENCRENAMVVKEGIINTGCFNIVSKDDGVPMVAFSLRDRSRYDEFMISAMLRHHGWVVPAYPMPPGADHITVLRVVIRADLSRTLAERLVLDITNVLHQLEMLPQYINEEDDHMATMNDHNNNNNNIEGVNRTFFDVQREILAQEANKRQKVLAA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0063 505 Gene3D - 5 71 - -
Mibi12g0063 505 Pfam Pyridoxal-dependent decarboxylase conserved domain 39 386 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi12g0063 505 Gene3D - 367 454 - -
Mibi12g0063 505 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 25 450 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mibi12g0063 505 FunFam Glutamate decarboxylase 72 366 - -
Mibi12g0063 505 FunFam Glutamate decarboxylase 367 454 - -
Mibi12g0063 505 PANTHER GLUTAMATE DECARBOXYLASE 11 497 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mibi12g0063 505 SUPERFAMILY PLP-dependent transferases 23 450 IPR015424 -
Mibi12g0063 505 Gene3D - 72 365 IPR015421 GO:0003824
Mibi12g0063 505 FunFam Glutamate decarboxylase 10 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0063 Mibi-ChrMibi12 1196153 1199488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0063 5 493 Calmodulin-binding Proteins AT5G17330 71.370 0.0 727