Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0049 ATGGTGCAACCTGACGTTATTCATCCCCCTCCCCTTGATCCTTTCTTTAGCCACTACTTTCCTGATGGCATGAAGATACTGTTGGTGAGCGCGGATGATGATTTCTACGGTTCAATTCGAGGGCATCTTCCTAAGCAATCATTTGACATTTCCTTGTGTGTCACTGTTGATTCTGCTTTAGATCGCCTCGTGAACGATAAAACATTTCACTTAGTTATTACTGACATAACGTTGGATGGTGGTGATAAATTTGTGAAAACACAACTCTTAACAACTAAAATTCCCAACGTTGTCATTTGTGGGGCTCAAGGTTCGACAGATATAAATATATTGACAAAGGCTTTTGAAACTGGAGCCTGTGATGTTCTTTGGAAACCCGTGGATGAGTTGGGTGATGCCATTATAGAACTGTGGAAATTTCCTAGTATAAGAATGGAACGAGCTAGAAGGGAACAAAATAGAGGGGAACAAAATAAAAGGTTCGTATGGAGCCAGGAAATTCATAACAAGTTTGTTTATGCTGTGAATCAGCTTGGGGAAAATGGTATGCATGAATATTTTCTCTCCCCTCCTCTTCATATATATTTCTCATGTTACGATAACCATGAATGTATGTTTTTTCTTGTTTCAGCGTCCCCTACAAATATTCTTCGAATCTTACAGGAGTATGAGCCTAATCTGACGAGAACTCAAGTTGCAAGCCACCTGCAACAATATAGAGATTATCAAAAGAAGGAGAAGAAGGAAGCGGACAACAAGCGACTTCTGGAACTCAGATTAGGTTTACCTGACAATGATGATGAACAAGGCGATTCCAAAGCAGCGTGTCATAATGCATAA 840 0.4 MVQPDVIHPPPLDPFFSHYFPDGMKILLVSADDDFYGSIRGHLPKQSFDISLCVTVDSALDRLVNDKTFHLVITDITLDGGDKFVKTQLLTTKIPNVVICGAQGSTDINILTKAFETGACDVLWKPVDELGDAIIELWKFPSIRMERARREQNRGEQNKRFVWSQEIHNKFVYAVNQLGENGMHEYFLSPPLHIYFSCYDNHECMFFLVSASPTNILRILQEYEPNLTRTQVASHLQQYRDYQKKEKKEADNKRLLELRLGLPDNDDEQGDSKAACHNA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0049 279 Gene3D - 23 158 - -
Mibi12g0049 279 SUPERFAMILY Homeodomain-like 157 245 IPR009057 -
Mibi12g0049 279 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 154 248 IPR044841 GO:0003700|GO:0006355
Mibi12g0049 279 Gene3D - 159 246 - -
Mibi12g0049 279 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Mibi12g0049 279 SMART REC_2 24 134 IPR001789 GO:0000160
Mibi12g0049 279 MobiDBLite consensus disorder prediction 260 279 - -
Mibi12g0049 279 SUPERFAMILY CheY-like 22 150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0049 Mibi-ChrMibi12 988067 989033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0049 20 250 Response Regulator Gene Family AT4G31920 26.136 8.84e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi12g0049 None None None