Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0042 ATGAATTTGTACGAGGAAGAGTTTCTGAGGAACATCGTGCAGAAACCAGAGAGTCCGTACTCACAGGATTTGGGTCCAATATGGTCGGAAATTATACTATCTTGTCATCAAAGAGATGAAACTGAAACTAATGGCACTAATTCCAGCGACCACGTGATGTCTCCTAGGGCATGCGTCCTTTCATTTGATAACTCGGCTGTAAATCCAATCATAACGAAGCATGAAGAGGTAAATGAAACATTGAAACGGAGTTCTTCGAAAAGGAGCCGATCGACCGCGGCGCAAAACGTGGACGCCGCCAGAAAGCAGAGCAAAAGGAGGTGTTCAGAGGAAGTAGAGAATCATATTATGGCAGAGAGGAGAAGAAGACAACGAATTACAGAAAAGTTCATCGCACTTTCTGCAACTATTCCCGGCTTGAAGAAGGTGATCGGTGCCTTTTTGGACAAAGTGACAATACTAGATGAAGCTATCAAATACGTTAAACAACTTCAGGACCGTGTAAGAGAGCTGGAGGGAGATCCGTCATTGGCATCCGTAAAGAGAATTGAGTTTAATGAGAATGACGACAACTTCTATGAAGTGAATGACGTACTGCCTAAGATTGAAGTTAGGGTTTCGGAGAAGCAAATGTTTATGGGAATCTATTGTGAGAAGCAGAAGGGCATAGAGTTCAAAATATTGAGCTTGCTTGAGAACTTTCATCTCTGTGTCACCAGTAGTAGCGTCTTGCCTTTTGGGATATCCACTCTTGGCATCACCATTATAGCTCAGGTGGGTGATGAGTACAATACGCCAGTGAATGAAGTAGTGAAAAACCTTCGACAAGTTCTGTTAAAGTCGCCATCATGA 852 0.4308 MNLYEEEFLRNIVQKPESPYSQDLGPIWSEIILSCHQRDETETNGTNSSDHVMSPRACVLSFDNSAVNPIITKHEEVNETLKRSSSKRSRSTAAQNVDAARKQSKRRCSEEVENHIMAERRRRQRITEKFIALSATIPGLKKVIGAFLDKVTILDEAIKYVKQLQDRVRELEGDPSLASVKRIEFNENDDNFYEVNDVLPKIEVRVSEKQMFMGIYCEKQKGIEFKILSLLENFHLCVTSSSVLPFGISTLGITIIAQVGDEYNTPVNEVVKNLRQVLLKSPS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0042 283 PANTHER BHLH TRANSCRIPTION FACTOR 41 280 - -
Mibi12g0042 283 Pfam Helix-loop-helix DNA-binding domain 113 165 IPR011598 GO:0046983
Mibi12g0042 283 Coils Coil 154 174 - -
Mibi12g0042 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 164 IPR011598 GO:0046983
Mibi12g0042 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 113 177 IPR036638 GO:0046983
Mibi12g0042 283 MobiDBLite consensus disorder prediction 78 111 - -
Mibi12g0042 283 Gene3D - 96 177 IPR036638 GO:0046983
Mibi12g0042 283 SMART finulus 116 170 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0042 Mibi-ChrMibi12 833470 835276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0042 95 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 39.535 2.19e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0042 HLH 1.9e-10 No_clan