Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0041 ATGGATGATTCATGGGAGACTGGTTTTGCTCAGTATCCAGACATGGACGTTGCTCAACAATTCCGAGGTTGTCAGACGATGATGAATTTGGACGAAGAAGAGGAAGAGTTTCTGAGGAACATCGTGCAGAAACCAGAGAGTCCGTACTCACAGGATTTGGGTCTAATATGGTCGGAAATTATACTATCTTGTCATCAAAGAGATGAAACTGAAACTAATGGCACTAATTCCAGCGACCACGTGATGTCTCCTAGGGCATGCGTCCTTTCATTTGATAACTCGGCTGTAAATCCAATCATAACGAAGCATGAAGAGGTAAATGAAACATTGAAACGGAGTTCTTCGAAAAGGAGCCGATCGACCGCGGCGCAAAACGTGGACGCCGCCAGAAAGCAGAGCAAAAGGAGGTGTTCAGAGGAAGTAGAGAATCATATTATGGCAGAGAGGAGAAGAAGACAACGAATTACAGAAAAGTTCATCGCACTTTCTGCAACTATTCCCGGCTTGAAGAAGTTGGACAAAGCGACAATACTGGACGAAGCTATCCAATACGTTAAACAACTTCAGGACCGTGTAAGAGAGCTGGAGAGAGATCCGTCATTGGCATCCGTAAAGAGAATTGAGTTTAATGAGAATGACGACAACTTCTATGAAGTGAATGAAGTACTGCCTAAGATCGAAGTTAGGGTTTCGGAGAACCAAATGTTTATGGGAATCTATTGTGAGAAGCAGAAGGGCATAGAGTTCAAAATATTGAGCTTGCTTGAGAACTTTCATCTCTGTGTCACCAGTAGTAGCGTCTTGCCTTTTGGGACATCCACTCTTGGCATCACCATTATAGCTCAGGTGACGTACAAATAA 861 0.4355 MDDSWETGFAQYPDMDVAQQFRGCQTMMNLDEEEEEFLRNIVQKPESPYSQDLGLIWSEIILSCHQRDETETNGTNSSDHVMSPRACVLSFDNSAVNPIITKHEEVNETLKRSSSKRSRSTAAQNVDAARKQSKRRCSEEVENHIMAERRRRQRITEKFIALSATIPGLKKLDKATILDEAIQYVKQLQDRVRELERDPSLASVKRIEFNENDDNFYEVNEVLPKIEVRVSENQMFMGIYCEKQKGIEFKILSLLENFHLCVTSSSVLPFGTSTLGITIIAQVTYK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0041 286 PANTHER BHLH TRANSCRIPTION FACTOR 65 284 - -
Mibi12g0041 286 Gene3D - 125 202 IPR036638 GO:0046983
Mibi12g0041 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 202 IPR036638 GO:0046983
Mibi12g0041 286 SMART finulus 145 194 IPR011598 GO:0046983
Mibi12g0041 286 Coils Coil 178 198 - -
Mibi12g0041 286 MobiDBLite consensus disorder prediction 107 140 - -
Mibi12g0041 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Mibi12g0041 286 Pfam Helix-loop-helix DNA-binding domain 142 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0041 Mibi-ChrMibi12 747646 749156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0041 144 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 45.806 3.40e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0041 HLH 2.1e-12 No_clan