Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0024 ATGTCTCGCCAGACTACAGGCTCTGCATATCACAAATCCAAGACCCTCGACAATAAATATCTGCTGGGAGATGAGATTGGGAAAGGAGCATATGGTCGGGTTTACAAAGGTTTGAACTTGGATAATGGAGACTTTGTTGCAATTAAACAAGTTTCCTTGGAGAATATTCCTCAGGAAGATCTCAACATCATCATGCAAGAGATTGATATGTTGAAGATTTTGAATCATAAAAACATTGTGAAATATCTTGGATCTTCAAAGACAAAGACTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCGAATACTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTATTGGAAGGTTTGGTTTATCTACATGAACAAGGGGTAATCCATCGAGATATTAAAGGTGCAAACATATTGACAACTAAAGAGGGTCTCGTTAAACTTGCTGATTTTGGTGTAGCAACAAAATTGACTGAGGCTGATGTCAATACTCATTCCGTTGTTGGATCACCATATTGGATGGCCCCAGAGGTCATAGAAATGTCTGGGGTTTGCGCTGCCTCTGACATTTGGAGTGTTGGCTGTACGGTTATAGAACTTCTTACATGCGTACCACCTTATTTTGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCGCTTCCAGATAGCTTGTCTCCGGACATCACTGATTTTTTATGCCAATGCTTTAAGAAGGTAAATTGGATAATATCCATGAGTTTGAATATTTTCCCTATTATATTTGGTGATGCTAGACAAAGGCCTGATGCTAAAACTTTGCTCTCTCATCCTTGGATACGAAACTGTAGACGTGCTCTGCAGTCATCACTTCGTCATGGCAGAACACGAAAAAATAAAGTGGAAGATGATTCAGTGGCTGCAGAGGTTTTTGGTGTTGATGATGACTCAGCTAAACAGTTTTTAACTGAGGCTTCTGATAGAAGGAAACCTGATGCCAACAATTTAAATCCTCGTTTGCTTCATGAGTCAATGGGAAAGCGAGTTCCATCTGATCAAGTTCTTGCCTTATCCATTTCTGAGAGGTCCTTACTACCAATTGGTCCTAAAAAAATTTCTTATCAAGAAGAGGCAAGATCTGAGGTCACCGGTGATCACAACTTCGCTAATTCTAGAGAACATGAAGTTATGATGAATGGGGAAGTAGAATATCAGCAATCAGAAGCGAATAGAAAACTGGGAGGAAAAGGCAGTTCAATTAACAATAGACTAAAAGGTCAAGATATAGTTTCCTTGAAGATGTCACCACTTGAGGGAAATGAGCTGAGTAAATTTAGTGATCCTTCTGGGGATGCCTACTTAGATTATCTGTTTCAGCCATTAGATAAGCACCCTGTGGAGTTGGCAGCTGAAACTTCTACGTCTGCATCTGTGTCAAACGTTGGGAATGCTATTGCATTGATGAAGAATAGTGGGAGAAATGACCTGGCTAAAGAGTTGAGGGATACAATTGCTCGGAAACAGTGGGAAAAGGAGAGTGAAATTGGACAGGAAAATAATGGTGGGAACCTTTTGCAGCTAATGATGGGAGTTCTAAAAGAAGAAGACGTTGATATGGATGGTTTGGTCTTTGATGAAAAACTTCCTGGAGAAAATCTCTTCCCTCTGCAGCACAACACCTATTTGGACGTCCTTAAATGTTCCCTGAGGGTCCTTTTTAAGGCGAGTAAAAATTGTGTGGCGTTCCTTAAACAAATGGATTGGTTATGGTGTCAATTAAAGGACTGTGGTGGGTACTGTTGTAACTTAACGTGTGATATGGACAAGAGGTGCCTTTGTCTGTTGCCTATTCTGAAACTGGAGATCACTAAGCACTATATGTAA 1917 0.4043 MSRQTTGSAYHKSKTLDNKYLLGDEIGKGAYGRVYKGLNLDNGDFVAIKQVSLENIPQEDLNIIMQEIDMLKILNHKNIVKYLGSSKTKTHLHIILEYVENGSLANTIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGSPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYFDLQPMPALFRIVQDEHPPLPDSLSPDITDFLCQCFKKVNWIISMSLNIFPIIFGDARQRPDAKTLLSHPWIRNCRRALQSSLRHGRTRKNKVEDDSVAAEVFGVDDDSAKQFLTEASDRRKPDANNLNPRLLHESMGKRVPSDQVLALSISERSLLPIGPKKISYQEEARSEVTGDHNFANSREHEVMMNGEVEYQQSEANRKLGGKGSSINNRLKGQDIVSLKMSPLEGNELSKFSDPSGDAYLDYLFQPLDKHPVELAAETSTSASVSNVGNAIALMKNSGRNDLAKELRDTIARKQWEKESEIGQENNGGNLLQLMMGVLKEEDVDMDGLVFDEKLPGENLFPLQHNTYLDVLKCSLRVLFKASKNCVAFLKQMDWLWCQLKDCGGYCCNLTCDMDKRCLCLLPILKLEITKHYM 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0024 638 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 304 - -
Mibi12g0024 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mibi12g0024 638 CDD STKc_Cdc7_like 19 291 - -
Mibi12g0024 638 ProSiteProfiles Protein kinase domain profile. 20 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0024 638 FunFam MAP3K epsilon protein kinase 1 17 322 - -
Mibi12g0024 638 SMART serkin_6 20 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0024 638 SUPERFAMILY Protein kinase-like (PK-like) 17 300 IPR011009 -
Mibi12g0024 638 Pfam Protein kinase domain 23 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0024 638 Gene3D Transferase(Phosphotransferase) domain 1 17 325 - -
Mibi12g0024 638 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0024 Mibi-ChrMibi12 512138 527394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0024 1 596 MAP Kinase Kinase Kinase AT3G13530 59.841 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Mibi12g0024 Pkinase 1.9e-64 CL0016