Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0006 ATGAACACAGAGAAGTTCAACCTACGAAGTACACAAGACTATAGATATCTCAGGCAGAGCAATTGTTATTTGATATCTGGTGTGAATGATGCAGAGGAATTTAGCATTGTCATGGAAGCTTTGGATGTTGTCCAGATCAGCAAAGAAGACCAGGAAAACGTATTTGCAATGCTTGCTGCAGTTCTATGGCTAGGAAACATATCTTTTACTGTAATTGATCATGAAAATCATGTCCAAGTTGTAGAAAACGAGGCTTTGTTCAACGTTGCCAAATTGATATGCTGTGACATTGGAGATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAATATTGTTCAAAAGTTGAAGCTATCACAGGCCATTGATGCTAGAGATGCTTTGGCGAAGTCAATATATTATTGTCTGTTTGAATGGTTGGTAGAGCAAATAAACAAATCACTTGTTGTTGGCAAAAGGTGTACAGGCAGATCAATCAGTATTCTGGATATATATGGATTTGAATCATTTGATAGAAATAGTCTTGAGCAGTTCTGTATCAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGTCATTTATTCAAGTTAGAACAGGAGGAATACATAAAGGATGGCATTGACTGGACAAAAGTTGAGTTTGAAGATAACCAAGACTGCCTCGATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGCTAGATGAAGAGTCCACTTTTCCTAATGGCACAGATCTGACATTTGCTAGCAAACTTAAGCTGCATTTGAATTCCAATTCATGTTTCAGAGGAGAGCGAGACAAGGCTTTTACTGTGTGTCACTATGCTGGGGAGGTCACATATGACACAACTGGATTTCTAGAAAAAAACAGGGACTTATTGCACTTGGATTCCATTCGACTTTTATCGTCATGCAGGTCTCATCTTCCTCAGATATTTGCATCCTTTATGCTCAATCAGTCTGAGAAGCCTGTTGTTGGTCCCTTACACAAGTTAGGCGGTGCTGATTCCCAAAAGTTAAGTGTTGCAACAAAGTTCAAGGGTCAATTGTTCCGATTGATGCAAAGGTTAGAGAGCACCAGCCCACATTTTATTCGCTGTATTAAGCCCAACAATCTCCAGTCTCCAGGATTATATGAGCAAGGTCTTGTGCTGCAGCAGCTAAAATGTTGTGGGGTACTAGAAGTTGTTCGAATATCAAGATCAGGCTTCCCTACTAGAATGTCTCACCAGAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTAGAGAGTGTTGCATCTCAGGATCCTCTTGATGTTTCAGTTGCAATTCTTCAGCAGTTTAATATTTCCCCTGATATGTATCAAGTTGGTTATACAAAACTATTTTTCCGAACAGGCCAGATTGGACTGCTTGAAGATACCAGAAACCGTACCCTCAATGGCATTTTACGTGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGGTGTTACGTAAAGGAACTTCGCAGAGGAATCATTACTCTTCAGTCTTTTATTAGGGGAGAGAATATCAGGAATGAATATGCAGCTTCACTTCGGAGACATCGGGCTGCTGTCCACATACAAAAGCAGATGAAAGCAATATTTGTAAGAAGCAGAATGAAGAATACTAATGAAGCTGCAATTGTTATACAATCAATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGGTCATTGAAATCTGAAGGCGTTAAGACAAATGAGTCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGGGAGAAAGAAGAGGAAAATGACATCCTCCACCAACGTCTCCAACAGTACGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTTTGGCAAAAGCAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAAAGCCTTGCGATTGATGGTTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTCTAGCTTGGATATAGAAAATAATCATAGACGCCAAGAAAGCAATGGAACAAGATCAATGAGCGCAGGCTTGAGTGTTATCAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGCCTAGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTGAAATCTGGTCAAGTTGAAGCAAGTTTGAAACCAGACCAGGAGCTCAGAAGGCTGAAGCAGATGTTCGAAGCTTGGAAAAAGGATTATGGTGCTAGACTACGTGAAACCAAGTTCATTTTACATAAGCTTGGAACCGATGAAGGTGCACTTGACAAAGTGAAAAAGAAATGGTGGGGGAGAAGGAACAGTACAAGGATAAATTGA 2406 0.409 MNTEKFNLRSTQDYRYLRQSNCYLISGVNDAEEFSIVMEALDVVQISKEDQENVFAMLAAVLWLGNISFTVIDHENHVQVVENEALFNVAKLICCDIGDLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYYCLFEWLVEQINKSLVVGKRCTGRSISILDIYGFESFDRNSLEQFCINYANERLQQHFNRHLFKLEQEEYIKDGIDWTKVEFEDNQDCLDLFEKKPLGLLSLLDEESTFPNGTDLTFASKLKLHLNSNSCFRGERDKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIRLLSSCRSHLPQIFASFMLNQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFRLMQRLESTSPHFIRCIKPNNLQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLDVSVAILQQFNISPDMYQVGYTKLFFRTGQIGLLEDTRNRTLNGILRVQSCFRGHQARCYVKELRRGIITLQSFIRGENIRNEYAASLRRHRAAVHIQKQMKAIFVRSRMKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDGSERNSDASVNASDERDSSLDIENNHRRQESNGTRSMSAGLSVISRLAEEFEQRSLVFGDDAKFLVEVKSGQVEASLKPDQELRRLKQMFEAWKKDYGARLRETKFILHKLGTDEGALDKVKKKWWGRRNSTRIN 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0006 801 Gene3D Myosin VI head, motor domain, U50 subdomain 47 175 - -
Mibi12g0006 801 Gene3D - 2 42 - -
Mibi12g0006 801 Gene3D - 410 477 - -
Mibi12g0006 801 PANTHER MYOSIN 4 795 - -
Mibi12g0006 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 521 IPR027417 -
Mibi12g0006 801 SMART MYSc_2a 1 477 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi12g0006 801 FunFam Unconventional myosin-XIX 174 366 - -
Mibi12g0006 801 MobiDBLite consensus disorder prediction 669 702 - -
Mibi12g0006 801 ProSiteProfiles IQ motif profile. 550 579 IPR000048 GO:0005515
Mibi12g0006 801 ProSiteProfiles IQ motif profile. 501 530 IPR000048 GO:0005515
Mibi12g0006 801 Gene3D Kinesin motor domain 339 409 IPR036961 -
Mibi12g0006 801 SMART iq_5 500 522 IPR000048 GO:0005515
Mibi12g0006 801 SMART iq_5 549 571 IPR000048 GO:0005515
Mibi12g0006 801 SMART iq_5 477 499 IPR000048 GO:0005515
Mibi12g0006 801 SMART iq_5 526 548 IPR000048 GO:0005515
Mibi12g0006 801 Coils Coil 596 644 - -
Mibi12g0006 801 Pfam Myosin head (motor domain) 3 464 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi12g0006 801 Gene3D - 481 527 - -
Mibi12g0006 801 Gene3D - 528 572 - -
Mibi12g0006 801 ProSiteProfiles IQ motif profile. 480 507 IPR000048 GO:0005515
Mibi12g0006 801 Pfam IQ calmodulin-binding motif 502 521 IPR000048 GO:0005515
Mibi12g0006 801 Pfam IQ calmodulin-binding motif 482 499 IPR000048 GO:0005515
Mibi12g0006 801 Pfam IQ calmodulin-binding motif 552 568 IPR000048 GO:0005515
Mibi12g0006 801 PRINTS Myosin heavy chain signature 162 190 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi12g0006 801 PRINTS Myosin heavy chain signature 215 243 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi12g0006 801 MobiDBLite consensus disorder prediction 675 696 - -
Mibi12g0006 801 Gene3D - 176 323 - -
Mibi12g0006 801 ProSiteProfiles Myosin motor domain profile. 1 476 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0006 Mibi-ChrMibi12 89645 111649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0006 4 799 Myosins gene family AT1G50360 75.940 0.0 1248