Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0001 ATGTCTAACTCTGACGGAGCTACAACCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAGCCGTCTTCCGGGAACGGCGCTCTGGCCGTCAAGAAGCCGCCGTCCAAGGACCGTCATAGCAAGGTGGACGGGCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCGCGTGTCTTCCAGCTCACACGTGAGTTGGGTCACAAATCCGACGGTCAAACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATAGCCGCCACCGGCACCGGCACTACTCCTGCCAGCTTCTCCACTGTTTCGGTCTCCGTACGCGGAGGAGGTTCCAACTCGCTGTCCTCGTCTTCTACCACTTCCGCTTCTCTCGACCATAAGCCCGCCCTGCTGGGCCCGACGCCCTTCATACTCGGAAAGCGCATACGGACCTCCGATGATGACGCTTCTAAGGATGATGGCGTCCCCACTATTGGGTCAATTGTGGGGCCGACCGCACCAGCTGGGTTGTGGGCACTTCCGGCTAGGCCTGACTTCAGCCAGGTGTGGAGCTTTGCCGCTGCTGCGCCTGAGATGGTGGTACAGCCGGCGGGCGTGTCAGTGTCGCAACAGCAGCAGCATGCTTCATTGTTCGTTCATCATCATCAGCAGCAACAAGCCATGGGTGAGGCTTCCGCGGCTCGATTGGGTAATTACCTTCCAGGCCATCTGAATTTGCTTGCTTCCTTGTCGGGTGGGCCCGGAAGTTCAGGTCGGAGAGATGAGGAGCCTCGATGA 783 0.6003 MSNSDGATTNGNGAIIDPQRQQPSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGSNSLSSSSTTSASLDHKPALLGPTPFILGKRIRTSDDDASKDDGVPTIGSIVGPTAPAGLWALPARPDFSQVWSFAAAAPEMVVQPAGVSVSQQQQHASLFVHHHQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGSSGRRDEEPR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0001 260 MobiDBLite consensus disorder prediction 34 49 - -
Mibi12g0001 260 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Mibi12g0001 260 MobiDBLite consensus disorder prediction 107 127 - -
Mibi12g0001 260 MobiDBLite consensus disorder prediction 1 49 - -
Mibi12g0001 260 MobiDBLite consensus disorder prediction 1 28 - -
Mibi12g0001 260 MobiDBLite consensus disorder prediction 107 129 - -
Mibi12g0001 260 Pfam TCP family transcription factor 37 128 IPR017887 -
Mibi12g0001 260 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 236 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0001 Mibi-ChrMibi12 53724 54506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0001 5 260 TCP Transcription Factor Family AT5G23280 65.385 1.49e-100 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi12g0001 TCP 3.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0001 12 53724 54506 Mibi12g0001 12 53724 54506 ECH