Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1925 ATGCCATCACGACCGTCTCCACCAATGCCTACGGCCTCACCCTCTCATCACCGCCGCTACCAATCAATCCTCATCGGTATTATCGGTCTGGCTTTCCTCCTCCTAATCCTCATCGTCTTCCTCATAGTCTTCCTCTACCGCAAACTCTCTTATAACCGAACAGCACCATTCGACCACTATAACCACAATCACCAGTATCGGCGTTTCTCATACTCTCTCCTTCGACGCGTCACCAACTCCTTCTCTGCGTCCACCAAGCTCGGCCATGGTGGATTCGGCTCGGTTCACAAGGCTACCCTGCCTTCTGGTCTCTCGGTGGCTCTCAAACTCATGGACTCCCCGGGGTCGCTTCAAGGGGAGCGAGAGTTTCACAACGAGCTTTCCCTCTGTTCCCAGCTTAGTTCACCTTTCATACTCTCTCTCCTGGGCTACTCTTCCGATCGCCGAGGCCGGAAACTGATTTTGGTTTATGAGCTCATGCCGAATCGAAGTTTGCAAGATGCGTTGTTGGATAGGAGGTGCGAGGAGCTTATGGAGTGGAAGAAGAGATTCGATGTTGCTGTTGACATCTCGAAGGGTCTTGAGTACCTTCACCATCATTGTAGTCCGCCCGTGATTCACGGGGACATTAAACCGAGTAACGTGTTGCTGGATGCCGACTTCTCGGCGAAGATTGGGGATTTCGGACTTGCTAGGTTGAAAACAGACGATCTGGAAATGGTGGAGGAAAATGGGGGAGAAGAAGAGGGCGCGAAGAGGGATGGGATTGGTGACTTGGGGGATGACCATGGGTCGATTTTGGAGGAGGCGGAGAGCGTCACCACTGGGTTTGAAGAAGGTAGTGCAGCGGTCGATCGGTCACCAGAGAGTTGCTTGATTAGGATTTTGGACTCTGAAGCCTCTCCGGAGACGACGGTAGCACTGTCGCCAGAGGTGGGGGCAAGTGTCTCAGAAGGGTGCTTTGATAAATTTAGCATTGATAGTGGAAAAGATTTGATCCGGAAGAAGGGTGGTTCGGGCAGGGATTGGTGGTGGAAGCAGGACAATGGAGGTGGGTCGGAATCGGGAAGGGTGAAAGATTATGTGATGGAGTGGATCGGGAGTGAGATTAAGAAGGAAAGACCAAAAGGCGAATGGATTGCGTCTCCAAGCACCGCAGGGGCTACTACTCCAGCCCAGCAAATCGAGTCAAAGAAGCAGAAAAAGAGATTGGATTGGTGGGCATCATCGGATGAAGAAAAAGTCAAGAAGAAGGAGACGAACCGGAAACCCAGAGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTCACCAAGAAGAAGAAGAAGAAGAAAAGAAGTCTGGATTCGAATTCCAATGGTGAATCATGGTGGCAGAAAGATGATGAAATGGTGCCAGTGAAAAAGAAGAAGAAGAAGAGCAAGAAGAGCAAGACTAGCAGAGGAAGCATTGACTGGTGGTTGGATGGTTTGAGCGGTGAGCTCAGAAATGGCAGAAGAAACAGCCAGGATTGGGTTAGTGGGGATATACCCAAGAGTGGTGGAATTAGCAGCACGCCAAGTATGAGAGGAACTGTTTGTTACATTGCTCCCGAATATGGTGGCGGTGGCCAGCTTTCTGAGAAATGTGATGTTTATAGTTATGGAGTTCTGCTCTTGGTTCTGATAGCAGGAAGACGACCTCTTCAAGTCACAGCATCACCAATGTCAGAATTTGAAAGGGCTAATCTCATTTCATGGGCTCGGCAACTTGCCCACAGTGGGAGGCTTTTGGATCTTATAGACCCTTCCATTCATTCATTAGACAAGGAGCAGGCATTGCTCTGCATCACCATTGCCTTGTTATGTCTACAGAGATCCCCAGCAAAGCGGCCGACCATGAAAGAGATTGTAGGCATGCTTTCTGGTGAGGCTGAGCCGCCGCACTTACCTTTTGAGTTTTCTCCATCACCGCCATCCAATTTTCCGTTCAAGTCCCGAAAGAAGGCTCGGTGA 1992 0.502 MPSRPSPPMPTASPSHHRRYQSILIGIIGLAFLLLILIVFLIVFLYRKLSYNRTAPFDHYNHNHQYRRFSYSLLRRVTNSFSASTKLGHGGFGSVHKATLPSGLSVALKLMDSPGSLQGEREFHNELSLCSQLSSPFILSLLGYSSDRRGRKLILVYELMPNRSLQDALLDRRCEELMEWKKRFDVAVDISKGLEYLHHHCSPPVIHGDIKPSNVLLDADFSAKIGDFGLARLKTDDLEMVEENGGEEEGAKRDGIGDLGDDHGSILEEAESVTTGFEEGSAAVDRSPESCLIRILDSEASPETTVALSPEVGASVSEGCFDKFSIDSGKDLIRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKGEWIASPSTAGATTPAQQIESKKQKKRLDWWASSDEEKVKKKETNRKPREWWKEEFCEELTKKKKKKKRSLDSNSNGESWWQKDDEMVPVKKKKKKSKKSKTSRGSIDWWLDGLSGELRNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSYGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHSGRLLDLIDPSIHSLDKEQALLCITIALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRKKAR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1925 663 MobiDBLite consensus disorder prediction 641 663 - -
Mibi11g1925 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mibi11g1925 663 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Mibi11g1925 663 MobiDBLite consensus disorder prediction 439 476 - -
Mibi11g1925 663 Pfam Protein kinase domain 518 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1925 663 ProSiteProfiles Protein kinase domain profile. 81 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1925 663 SMART serkin_6 81 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1925 663 PANTHER OS07G0586332 PROTEIN 1 663 IPR044576 -
Mibi11g1925 663 FunFam Os07g0541700 protein 160 245 - -
Mibi11g1925 663 MobiDBLite consensus disorder prediction 373 403 - -
Mibi11g1925 663 SUPERFAMILY Protein kinase-like (PK-like) 56 652 IPR011009 -
Mibi11g1925 663 Gene3D Transferase(Phosphotransferase) domain 1 160 259 - -
Mibi11g1925 663 Gene3D Transferase(Phosphotransferase) domain 1 489 639 - -
Mibi11g1925 663 Gene3D Phosphorylase Kinase; domain 1 52 159 - -
Mibi11g1925 663 Pfam Protein tyrosine and serine/threonine kinase 84 243 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1925 Mibi-ChrMibi11 41064157 41066148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1925 511 633 Receptor kinase-like Gene Family AT3G58690 37.984 1.06e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mibi11g1925 PK_Tyr_Ser-Thr 1.8e-26 CL0016