Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1912 ATGTATTCTTATAAAAACCTAGCTAATTATAACGCTATATGTGAAAAGTTTCACTTTGGATGTGTTTATGGTTCTTATGGCTCTCGACATTTGTTCCTGAAATTAAATGCAAGTGAAGCATGCGCATTGGGTTTTGCTACCAATGGGACCCCTGTTGGCCACTCGAGCTTCGTAATTAAGGGATTTGCTTCTAAGAAGAGAGAGGATAAGAAAATGCAGAGAGGGAGAGCCGACAAGCTACAGCGTCCCGTACCGGTCACGCAAAGAACAGCTAAGAAGAGCTTTACTTTGCGCAGCCTCTATTGGAATCCCTTGTGGGTCATCTCACGAACTCATTTCACTATCAAACTTATTAAAGCTCTCTCAGTTTGGCTTTCATACACTCTCCCTCTCTACCAAACTTCTTCTTCATCCTTGAAAATTCCTGATTCTTCCTCTCTAACAACAACAACAACAACAACAACAACAACAACCATGGTGGTTGAAGATAACACAAATCAACATGATGATGGTCGTTCAACAGAAGAATGGTTGTTTCAGGCACAAGAGCTTGTCCCTCTTGCTCTTGAGAAGGCCAAGGAGGTGAAGAATTTCCCAGGAAGGTGGAAGATGATCATATCAAAACTTGAACAGATCCCAACTCGTTTATCAGACTTGTCCAGCCATCCATGTTTCTCCAAGAACGCTTTCTGCAAGGAGCAATTGCAGGCTGTATCATCGATCCTCAGAGAAGCCATTGATTTGGCTGAGCTTTGCGTGAAGGAGAAGTACGAAGGGAAGCTCAAGATGCAGAGTGACCTCGACGCCTTATCGGGAAAACTCGACTTGCACTTGAAAGATTGCAGCCTGCTGATCAAAACTGGAGTTCTCGGTGAGGCCACTCTGCCATTAGCAATGTCATCAAAAGCTGATGCTGATGCTTCAAGCAATATCAGGGAGTTACTGGCTCGCCTCCAGATCGGTCACTTGGAGGCGAAACACAGGGCTATAGAGAAACTTCATGATGTGATGAAAGAAGATGAGAAGAGTGTTTTAGCTGTCTTAACACGTAGCAACATAGCTGCTTTGGTTCAATTGCTCACTGCTACTTCTCCAAGGATAAGGGAGAAAACTGCCTCCATTATATGCAGCCTTGCAGAATCAGGAAGCTGTGAGAATTGGTTAGTTTCTGAAGGAGTTATTCCTCCTCTGATAAGGCTTATTGAATCAGGAAGTGCAGTTGGGAAAGAGAAGGCTACCATAACATTTCAGAGGCTTTCCATGTCATCAGAAACTGCTCGTGCCATCGTTGGACATGGCGGGGTTCGTCCTCTCATTGATCTCTGTCAGACTGGTGATTCTGTGTCACAGGCTGCTTGTGCTTGTACCTTGAAGAACATATCTGCCGTCCCTGAGGTTCGACAAGTTCTGGCCGAGGAAGGGATTGTTAAGGTAATGATCAGTCTCCTGAACAGTGGAATGCTGTTGAATTCCAAAGAGTATGCAGCTGAGTGCCTACAGAATCTCACCTCAGGCAATGAGAATCTAAGAAGGCTTGTCATATCAGAAAATGGAATAAGAAGCCTTTTAGCTTATTTAGACGTTCCTCTCCCACAAGAATCTTCAATGGGAGCCTTGAGGAATTTAGTAGCATCTGTCTCTGAGCAATCTCTAGTTTCCATGGGCCTACTTCCTCGCCTGGCTCATGTCCTGAATTCCGGGTCTACCGGGGCCCAACAAGCGGCCGCTTCCACAATCTGCAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGATTGGTGAGGCTGGGTGTGTCCCTCTGCTTGTGAAAATGCTGGAGGCTAAGTCTAATGGTGCCAGGGAGGTGGCTGCACAGGCGATTTCAAGCTTGATGGTGCTGTCTTTGAATCAAAGAGAGGTGAAGAGGAATGACAAGAGTGTGCCTAATCTTGTTCAGTTGCTTGATCCAAATCCTCAAAATACTGCGAAGAAATATGCTGTGGCGTGCCTTGGATCGCTTTCTTCGAGTCAAAAGTGTAGAAAACTGATGATCTCCTACGGAGCAATCGGCTATCTGAAGAAGCTCAACGAGATGGAGATCCCGGGAGCCAAGAAGCTACTTGAGAGATTGGGAAGAGGGAAATTGAGGAGCTTGTTTAGCAGGAAATAA 2148 0.453 MYSYKNLANYNAICEKFHFGCVYGSYGSRHLFLKLNASEACALGFATNGTPVGHSSFVIKGFASKKREDKKMQRGRADKLQRPVPVTQRTAKKSFTLRSLYWNPLWVISRTHFTIKLIKALSVWLSYTLPLYQTSSSSLKIPDSSSLTTTTTTTTTTTMVVEDNTNQHDDGRSTEEWLFQAQELVPLALEKAKEVKNFPGRWKMIISKLEQIPTRLSDLSSHPCFSKNAFCKEQLQAVSSILREAIDLAELCVKEKYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLPLAMSSKADADASSNIRELLARLQIGHLEAKHRAIEKLHDVMKEDEKSVLAVLTRSNIAALVQLLTATSPRIREKTASIICSLAESGSCENWLVSEGVIPPLIRLIESGSAVGKEKATITFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNSGMLLNSKEYAAECLQNLTSGNENLRRLVISENGIRSLLAYLDVPLPQESSMGALRNLVASVSEQSLVSMGLLPRLAHVLNSGSTGAQQAAASTICKICSSGEMKKMIGEAGCVPLLVKMLEAKSNGAREVAAQAISSLMVLSLNQREVKRNDKSVPNLVQLLDPNPQNTAKKYAVACLGSLSSSQKCRKLMISYGAIGYLKKLNEMEIPGAKKLLERLGRGKLRSLFSRK 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1912 715 Pfam Armadillo/beta-catenin-like repeat 423 462 IPR000225 GO:0005515
Mibi11g1912 715 Pfam Armadillo/beta-catenin-like repeat 587 623 IPR000225 GO:0005515
Mibi11g1912 715 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 165 713 - -
Mibi11g1912 715 Gene3D - 297 548 IPR011989 -
Mibi11g1912 715 SMART arm_5 545 584 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 463 504 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 340 380 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 585 625 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 422 462 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 506 544 IPR000225 GO:0005515
Mibi11g1912 715 SMART arm_5 627 668 IPR000225 GO:0005515
Mibi11g1912 715 SUPERFAMILY ARM repeat 306 690 IPR016024 -
Mibi11g1912 715 Gene3D - 549 692 IPR011989 -
Mibi11g1912 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 474 518 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1912 Mibi-ChrMibi11 40872516 40879429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1912 289 634 U-box Gene Family AT3G54790 25.348 2.80e-16 81.3