Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1909 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTGATTGGATTTGGTATGAGTGCCACTTTTATTGTGTTTGTCTGTACAAGGATAATCTGTGGAAGGTTGCGAGGCTCCTCGGAATCTCATAATATGTTTGAATTCGAACCTAGGATGGATATGGAACAGCCAGAACATCTTAACCGCTCCGAACCTGTTATTGTTACTGCGATTCCCACCATGAAGTTCGACCGAGAGGCTTTCAGTTCTATTGAAAATACACAGTGTGTGATATGTTTGGCAGAGTACAAAGAAAGGGAGGTACTGCGCATCATGCCAAAGTGTGGGCATAGCTTCCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCCACCTGCCCAGTATGTCGTCTTCCATTACAGAATTCTTCAGAGACAAAGCATGTGAGACCGGTAACATTTAGCTTAAGGCAAGGAGAGTCTCAGAGTTCTGAAAGTAGAGACATTGAGAGTAATAGCCAGCCTGTGCCCGGGAATCCCTCACCTTTAAGGCAATCAGATGCTGCAGAAGCAGAAACAAGGCAATGA 564 0.445 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICGRLRGSSESHNMFEFEPRMDMEQPEHLNRSEPVIVTAIPTMKFDREAFSSIENTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDIWLRKQSTCPVCRLPLQNSSETKHVRPVTFSLRQGESQSSESRDIESNSQPVPGNPSPLRQSDAAEAETRQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1909 187 SMART ring_2 87 128 IPR001841 -
Mibi11g1909 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 139 IPR013083 -
Mibi11g1909 187 PANTHER OS11G0150450 PROTEIN 1 179 - -
Mibi11g1909 187 SUPERFAMILY RING/U-box 78 135 - -
Mibi11g1909 187 MobiDBLite consensus disorder prediction 139 187 - -
Mibi11g1909 187 CDD RING-H2_PA-TM-RING 86 129 - -
Mibi11g1909 187 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Mibi11g1909 187 MobiDBLite consensus disorder prediction 139 173 - -
Mibi11g1909 187 Pfam Ring finger domain 86 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1909 Mibi-ChrMibi11 40785653 40787154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1909 8 132 C3H Transcription Factor Family AT1G72220 33.588 2.39e-20 85.5