Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1900 ATGACGAGCTCAGAAGAAGCAAACCTCCAACAGTTCCTCCTGTGGTTACAGGCTAATGGAGTTCAACTACAAGGCTGCAACATCAAGTATTGTGATTCCAGAAAAGGGTTTGGCATCTTTTCAACTAAAGATTTTTCCGATGGGGTTCTACTGGTTGTTCCGCTAGATTTAGCTATAACTCCAATGAGGGTATTGCAAGATCCCCTTCTTGGTCCTGAATGCAGGGCAATGTTCGAAGAAGGAGAAGTAGATGACAGGTTCTTGATGATTTTGTTCTTGACTGTGGAGCGCTTGCGCCATAATTCTTCGTGGAAGCCGTACCTTGATATGCTTCCAGCCAATTTCAGAAATCCACTTTGGTTTAGTGATGATGATCTTCAAGAGCTAAGGGGAACATCATTATTACGTGCTACTGAATTGCAGAAGAAAAACTTGCTGTCGTTGTATGATACAAAAGTAAAGGCTTTGGTGAAGAAGCTCTTGACTCTTGGTGGATATTCAGAGACTGAGGTGTGCTTTGAAGATTTCCTATGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAACATCCCTTTTCCTCGTTCTTCAGTATTTCCAAAAATGCAAACATCTGACAGCCGCAGTTCAGTCAACGGAAGTGTCCAGACTTCAATTAATGAAAGCCAGGTTGAAAAATCTGATGATGAAGTCAATGAGGCCTGTAACAAAATACAAGGAGACCCAGTTTGGGTGGAGGGTCTTGTCCCGGGCATCGACTTTTGCAACCATGATCTGAAGCCAATAGCAACTTGGGAAATAGATGGAACTGGATCGATCACACATGTTCCTTCTTCCATGTACCTTATCTCTGCCACGCAAAGTCCCTTGGAGATTGGTCAAGAAATTTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTTTATGGTTTTGTGATCGATGATAACCCAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGCTTCAATATCTTGCTCAGAATCCAAGAGTCAGCTTCTTGAAGCGCAGAAGGCTGAGATGAGATGTCTTTTACCGAAGACTTTGCTGGATGATGGATTTTTTCCAGTAGGCACCAAAAAGGGTGGGGAAAATGACAAGTGCAAGGCGAACCAATCTTGCAATTATAGTTGGAGCGGTCAACGGAAGACACCATCTTATGCACATAAGCTGGTTTTTCCCGAGAAGTTTATGACAGCATTGAGGACCATTGCCATGCAGGAGAACGAGATCTTCAAAGTTTCCTCAATGCTCGAAGAGCTTCTTGGATCTGGAGGGGTGAAGGAACTATCAGATACAGACGTTCAATCAGCAGTATGGGAGGTTTGTGGTGATTCTGGAGCCTACCAATTGCTCGTTGATCTTCTTCGAGTTAAGTTAATGGATCTTGAAGAGGGCTCAGGAACGGAGGAGAGCGACACTGATTTGCTGAACAAGGCCCTTATTATTGATAGCTGGGATGATAACCAACAGTTGAAGAGTAGTTCAAGCACCACCAATGAGACTGAGGAGCATAAGTTTATGAGCAGAAACAAATGGTCTTCTATAGTATATCGGCGAGGGCAAAAGCAACTCACTCGCTTATTCTTGAAAGAAGCAGAACAAGCTCTGCAATTATCCATAGAGGAGGAAGAGAGATAG 1674 0.4331 MTSSEEANLQQFLLWLQANGVQLQGCNIKYCDSRKGFGIFSTKDFSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEEGEVDDRFLMILFLTVERLRHNSSWKPYLDMLPANFRNPLWFSDDDLQELRGTSLLRATELQKKNLLSLYDTKVKALVKKLLTLGGYSETEVCFEDFLWANSVFWSRALNIPFPRSSVFPKMQTSDSRSSVNGSVQTSINESQVEKSDDEVNEACNKIQGDPVWVEGLVPGIDFCNHDLKPIATWEIDGTGSITHVPSSMYLISATQSPLEIGQEISISYGNKGNEELLYLYGFVIDDNPDDYLMVHYPAEAIASISCSESKSQLLEAQKAEMRCLLPKTLLDDGFFPVGTKKGGENDKCKANQSCNYSWSGQRKTPSYAHKLVFPEKFMTALRTIAMQENEIFKVSSMLEELLGSGGVKELSDTDVQSAVWEVCGDSGAYQLLVDLLRVKLMDLEEGSGTEESDTDLLNKALIIDSWDDNQQLKSSSSTTNETEEHKFMSRNKWSSIVYRRGQKQLTRLFLKEAEQALQLSIEEEER 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1900 557 ProSiteProfiles SET domain profile. 24 300 IPR001214 GO:0005515
Mibi11g1900 557 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 501 - -
Mibi11g1900 557 SUPERFAMILY SET domain 8 318 IPR046341 -
Mibi11g1900 557 CDD SET_LSMT 32 314 - -
Mibi11g1900 557 Coils Coil 541 557 - -
Mibi11g1900 557 Gene3D set domain protein methyltransferase, domain 1 5 314 - -
Mibi11g1900 557 Pfam SET domain 36 300 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1900 9 355 NAC Transcription Factor Family AT3G56570 25.201 6.77e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi11g1900 SET 2e-12 No_clan