Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1879 ATGAGTTTGATGGGATTCCCAGATATATCTCCATACAGCAGCAACGAGTCTTCTAGAATGCCTTCTGGTGTAATCTCACAGCCTCGCCTTCTCTCTTCCAACCCCTCTGCTAAAGCCATGTTCAACTCTCCTGGACTCTCCCTTGCCCTTCAGACGGATATAGATGGGGGGCAAAGGGAAGGAAGTAGAATGTCTGAGAATTATGAGATGAATGTTAATGGGAGAAGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGACAACTTGGATGTTGCTTCCGGCGACGATCAAGACGCCTCCGATCTCCCTCCCCGGAAAAAACGCTACCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCTTTGTTCAAGCAGTGCCCTCACCCGGATGAGAAGCAGAGAATGGAACTGAGCAGGAGGCTAAGTTTGGAAACAAGGCAAGTGAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGGTACCCATGACCCAATTGGAACGCCATGAGAATACACTTCTGAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCATTAGAGATGCCATGAGGAACCCCATTTGCTCTAACTGTGGGGGACCAGCTGTGATGGGAGACATTTCTCTTGAGGAACAGCATCTCCGGGTCGAAAATGCCCGGTTAAAGGACGAATTAGACCGGGTTTGCGCCCTCGCGGGAAAGTTCCTTGGCCGCCCGGTGTCTTCATTTCCCAACTCAATGCCTCATCCTCCATTGGCAAACTCAAGTTTGGAACTTGGAGTTGGATGCAATGGTTTTGGTGGTATAAGCACTGTGCCCGCAACATTGCCTATAGGGCCTGACTTGGGTGTGAGCATATCTAGCCCTTTAGCCATGGGGACTCCTCCTCATCCGACTCCAGCTAGACCGGCAGCCAGCTCGGGGTTAGAGAGGTCCATGTTTCTAGAGCTAGCTCTGGCTGCCATGGATGAATTGGTGAAGATGGCTCAGACTGATGAGCCTCTATGGGTTAGGAGTTTGGAAAATGGAAGAGAAATCCTGAACCATGATGAGTACTCAAGGACTTTCACTCCTTGCATTGGCTTAAAACCTAATGGATTTGTTTCTGAAGCCTCAAGGGAGACTGGAATGGTCATCATAAACAGCCTGGCCCTTGTTGAAACTTTGATGGACTCGAATCGTTGGGCAGAGATGTTTCCTTGTATGGTAGCAAGAACTTCCAATCCTGAAGTAATATCTGGTGGAATAAATGGAACTAGAAATGGTGCTCTTCAACTAATGCAGGCGGAGCTGCAAGTTTTGTCGCCGCTGGTGCCGGTCCGGGAGGTGAACTTCCTCAGATTCTGCAAGCAGCATGCGGAGGGAGTATGGGGTGTGGTGGATGTGTCCATTGATAGTGTGAGGGAAACTTGTGGTGCATCACCTTTTGTCAACTGTAGGAGGCTTCCTTCTGGCTGTTTAGTTCAAGACATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGGCAAGTTCACGAGATATACAGAGGATTGTTAAGTTCAGGCTTGGGTTTTGGCGCCCAACGTTGGCTCGCCACCCTCCACCGTCAATGCGAATGCCTCGCCATTTTAATGTCTTCCTCACTTCCCTCACGTGACCATTCTGCCATTACTGCGGGTGGGCGGCGGAGCATGTTGAAGCTAGCGCAGCGAATGACTAACAACTTTTGCGCAGGCGTTTGTGCCTCCACGGTGCACAAATGGAACAAGCTCAATGGCGGCAATGTCGGGGAGGATGTCCGGGTCATGACCCGGAAGAGCGTCGACGACCCGGGGGAGCCGCCGGGGATCGTGCTGAGCGCCGCCACGTCGGTGTGGCTGCCGGTGTCGCCGCAGCGAGTGTTCGATTTTCTCCGGGACGAACGGCTCCGGAGCGAGTGGGACATACTGTCCAACGGTGGGCCCATGCAGGAGATGGCCCACATTGCCAAGGGCCAAGACCACGGCAACTGCGTCTCCCTCCTCAGAGCCAGCGGTATGAATCCGGGGCAGAGCAGCATGCTGATATTGCAGGAGACATGCATAGACGCGGCGGGGGCGCTTGTGGTGTACGCGCCGGTGGACATCCCGGCGATGCACCTCGTAATGAACGGTGGGGATTCAGCCTACGTGGCGTTGTTGCCGTCGGGCTTCGTGGTTGTGCCGGACAACGGTGGCGGAGGAGGAGGGAGAGGGAGTGGGTCCCTGTTAACGGTGGCGTTTCAGATATTGGTGAACAGCCTGCCGACGGCGAAGCTTACGGTGGAGTCAGTGGAGACGGTGAACAACCTCATCTCTTGTACCGTTCAGAAGATAAAGGCAGCCATTCGCTGTGATGCCTGA 2397 0.5269 MSLMGFPDISPYSSNESSRMPSGVISQPRLLSSNPSAKAMFNSPGLSLALQTDIDGGQREGSRMSENYEMNVNGRRSREEEQESRSGSDNLDVASGDDQDASDLPPRKKRYHRHTPQQIQELEALFKQCPHPDEKQRMELSRRLSLETRQVKFWFQNRRTQMKVPMTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAVMGDISLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSFPNSMPHPPLANSSLELGVGCNGFGGISTVPATLPIGPDLGVSISSPLAMGTPPHPTPARPAASSGLERSMFLELALAAMDELVKMAQTDEPLWVRSLENGREILNHDEYSRTFTPCIGLKPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCMVARTSNPEVISGGINGTRNGALQLMQAELQVLSPLVPVREVNFLRFCKQHAEGVWGVVDVSIDSVRETCGASPFVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHEIYRGLLSSGLGFGAQRWLATLHRQCECLAILMSSSLPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNGGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRVFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASGMNPGQSSMLILQETCIDAAGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVVVPDNGGGGGGRGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAIRCDA 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1879 798 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 105 794 IPR042160 -
Mibi11g1879 798 Pfam Homeodomain 108 163 IPR001356 GO:0003677
Mibi11g1879 798 FunFam Homeobox-leucine zipper protein GLABRA 2 321 544 - -
Mibi11g1879 798 ProSitePatterns 'Homeobox' domain signature. 140 163 IPR017970 GO:0000981|GO:0006355
Mibi11g1879 798 SUPERFAMILY Homeodomain-like 93 163 IPR009057 -
Mibi11g1879 798 ProSiteProfiles START domain profile. 312 548 IPR002913 GO:0008289
Mibi11g1879 798 MobiDBLite consensus disorder prediction 7 49 - -
Mibi11g1879 798 SUPERFAMILY Bet v1-like 566 785 - -
Mibi11g1879 798 SUPERFAMILY Bet v1-like 314 545 - -
Mibi11g1879 798 SMART START_1 321 545 IPR002913 GO:0008289
Mibi11g1879 798 FunFam Homeobox-leucine zipper protein HDG1 95 184 - -
Mibi11g1879 798 Pfam START domain 321 545 IPR002913 GO:0008289
Mibi11g1879 798 ProSiteProfiles 'Homeobox' domain profile. 105 165 IPR001356 GO:0003677
Mibi11g1879 798 CDD homeodomain 107 163 IPR001356 GO:0003677
Mibi11g1879 798 Coils Coil 169 194 - -
Mibi11g1879 798 MobiDBLite consensus disorder prediction 72 87 - -
Mibi11g1879 798 MobiDBLite consensus disorder prediction 1 115 - -
Mibi11g1879 798 Gene3D - 94 179 - -
Mibi11g1879 798 CDD START_ArGLABRA2_like 316 544 - -
Mibi11g1879 798 SMART HOX_1 106 169 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1879 Mibi-ChrMibi11 40435866 40441594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1879 35 798 Homeobox Transcription Factor Family AT3G61150 66.921 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi11g1879 START 5.5e-54 CL0209