Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1876 ATGTTAACAACGACCACCTCGTTGCCGGATTCCTCCGCAGACCCATCGCCCCTTATTCCTTCCGCCGTCTCCGGCGAAGTGCTCCGGCGGCCGTCGGGGCCGTTACGGAGTGCGGCGAGGTTTTTCCGGCAAGCTAGCGGGCGGCGGATGATGCTCCGGGAGCCGTCGGTGAGGGTGAGGGAGAACGCGGCGGAGCAGCTGGAGGCGCGTCAGAGTAATTGGGCTTTTTCAAAGCCAGTGGTGATTTTGGATGTTGTTTGGAACTTGGCGTTTGTGATTAGTGGGATTCTAGTTTTGGGGCTGAGCTTTGAGGAGAAGCCTTCTGTTCCTTTGAGGGTTTGGGTTTGTGGGTATTTGCTTCAAGGTGTGTATCACTGTGTGCGTGTGATTCTCAAGTACAGACGATACATGCAAGGGCAAGGCCAATCACAAGCACGTTCTGCATCTGAAGAACAACAGTATCAGAATGGGATCTATTGGGAAAGAGGTGGGGGTTTTAATTCTAGCTCTGGGAGTGATGTTGGCGATGCAAATGATGAACAAAATCAGGAAGGATATAGCAGCAGAAATCGGATGGAATCTGTGAATACTTTGTTTTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACCACTGGTGGCCAGAGCTTGACCCAAGATGCCCCTCAGCTTTACTGGCTCTGTATCACCTTCCTTGCCATCGACATTGTAATTGTGTTGATCTGTGTGGTTGTGGCATGCCTCGTTGGTATTGCTGTTTGCTGCTGTCTTCCATGCATACTTGCTTTTTTATCGGTGGTGGTGGATAAGGAAGGGGCAACTAAGGAAGAAATCAATCGGCTGCCGAAATACAAGTTCAAGAGTGCAGATGAGTATAAGCTTAACGTTGACGATGTCGATGTTGCCCAAGCGTTATGTTGTAAAGGAATAATGACGGAATGTGACAGTGAGACGCCTGCAGAACATGTTCTTTCCACCGAAGAGGCAGAGTGCTGCATCTGCCTGTGTGAGTATGAGGATGGAGAGGAGTTAAGAGAACTTCCGTGCGGCCACCATTTTCACACGGACTGCATCGACAAGTGGCTATACATAAACGCTAACTGCCCTCTCTGCAAGTTCAATGTTCACACAGGAAACCATTCCCCAGTTTGA 1155 0.4944 MLTTTTSLPDSSADPSPLIPSAVSGEVLRRPSGPLRSAARFFRQASGRRMMLREPSVRVRENAAEQLEARQSNWAFSKPVVILDVVWNLAFVISGILVLGLSFEEKPSVPLRVWVCGYLLQGVYHCVRVILKYRRYMQGQGQSQARSASEEQQYQNGIYWERGGGFNSSSGSDVGDANDEQNQEGYSSRNRMESVNTLFSFIWWLLGFYWITTGGQSLTQDAPQLYWLCITFLAIDIVIVLICVVVACLVGIAVCCCLPCILAFLSVVVDKEGATKEEINRLPKYKFKSADEYKLNVDDVDVAQALCCKGIMTECDSETPAEHVLSTEEAECCICLCEYEDGEELRELPCGHHFHTDCIDKWLYINANCPLCKFNVHTGNHSPV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1876 384 MobiDBLite consensus disorder prediction 169 188 - -
Mibi11g1876 384 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Mibi11g1876 384 SUPERFAMILY RING/U-box 323 377 - -
Mibi11g1876 384 Pfam Ring finger domain 331 373 IPR001841 -
Mibi11g1876 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 379 IPR013083 -
Mibi11g1876 384 SMART ring_2 332 372 IPR001841 -
Mibi11g1876 384 CDD RING-H2_RNF111_like 331 375 - -
Mibi11g1876 384 PANTHER TARGET OF ERK KINASE MPK-1 46 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1876 Mibi-ChrMibi11 40416181 40419089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1876 9 381 C3H Transcription Factor Family AT1G68070 42.857 1.09e-102 305