Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1875 ATGATGAGAAGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAACACTAAGAGAGCTAAGTTTGATCAAGAAACTGAAGGAAGAGTCAATGAAGAAACAAATCCTGTTGAGAGAGGCAGAACACATATAGAGCAGCATGTTTGTGCGCTAGGAGATTCTACTGTAGGCACATCCAATGCGTCTATGGTGGATAGGACAGAGAAATCAGGTTATGATCAGCTTCCTAAAGAAATGAATGAAATGAAAATCAGAGATGAGAAAGGCAACAACCGCAATGAAAAGGATATGGAGCCAGCTATTGTGAATGGTAATGGAACTGAAACAGGGCAGGTAATTACTACAGCCATTGGTGGTCGTGATGGACAACCAAAGCAGACCATATCGTATATGGCAGAACGTGTGGTTGGTACTGGTTCATTTGGTGTTGTTTTTCAGGCTAGGTGTCTTGAAACTGGTGAAACAGTTGCCATAAAGAAGGTTTTACAAGACAAGAGATATAAGAATAGGGAATTACAGGTCATGCGCATCCTTGACCATCCCAATGTTATTCATCTAAAGCACTGTTTCTTTTCAACTACTGAAAAAGATGAGTTGTACCTGAACCTGGTTTTGGAGTATGTATCCGAAACCGTCTACAGAGTTTCAAAGCACTATATCAGAATGCATCAACATATGCCTATAATTTACATACAACTGTATACATACCAGATATGCCGTGCATTAAACTATCTACACAATGTACTTGGTGTCTGTCACCGTGACATCAAACCACAGAATTTATTGGTTAATCCCCATACTCATCAGCTAAAGGTCTGTGATTTTGGGAGTGCAAAGATGCTGGTGCCTGGTGAACCCAACATATCATATATATGCTCACGCTATTATAGAGCTCCTGAACTCATATTTGGGGCAACTGAATACACAAATGCCATTGATATGTGGTCTGTTGGTTGTGTTCTGGCTGAGCTCCTTCTAGGACAGCCAATGTTCCCCGGGGAGAGTGGGGTTGATCAGTTGGTGGAAATAATCAAGATATTGGGGACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTCAAGTTTCCTCAAATTAAGGCACACCCATGGCACAAGGTTTTCCACAAGAGAATGCCTTCAGAAGCTGTTGATCTAGTATCAAGGCTGCTCCAGTATTCACCAAAACTACGGTGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTCAATGATCTGAGAGACCCAACTATATGCCTGCCGAATGGGCGACCTCTGCCTCCTTTGTTCGACTTTACAGCTCAAGAATTGGCTGGTGCACCTACTGAGTTGCGTCAACGTCTCATTCCCGAACATGCAAGGAGTTGA 1404 0.4295 MMRRLKSIASGRTSISSDPGGDSNTKRAKFDQETEGRVNEETNPVERGRTHIEQHVCALGDSTVGTSNASMVDRTEKSGYDQLPKEMNEMKIRDEKGNNRNEKDMEPAIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQVMRILDHPNVIHLKHCFFSTTEKDELYLNLVLEYVSETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHNVLGVCHRDIKPQNLLVNPHTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPKLRCTALEACAHPFFNDLRDPTICLPNGRPLPPLFDFTAQELAGAPTELRQRLIPEHARS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1875 467 Gene3D Transferase(Phosphotransferase) domain 1 218 466 - -
Mibi11g1875 467 Gene3D Phosphorylase Kinase; domain 1 123 217 - -
Mibi11g1875 467 MobiDBLite consensus disorder prediction 1 43 - -
Mibi11g1875 467 SUPERFAMILY Protein kinase-like (PK-like) 137 448 IPR011009 -
Mibi11g1875 467 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1875 467 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 102 466 - -
Mibi11g1875 467 MobiDBLite consensus disorder prediction 24 43 - -
Mibi11g1875 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Mibi11g1875 467 MobiDBLite consensus disorder prediction 9 23 - -
Mibi11g1875 467 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1875 467 FunFam Shaggy-related protein kinase kappa 218 466 - -
Mibi11g1875 467 CDD STKc_GSK3 133 425 IPR039192 -
Mibi11g1875 467 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1875 467 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524
Mibi11g1875 467 FunFam Glycogen synthase kinase-3 beta 122 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1875 Mibi-ChrMibi11 40409793 40414340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1875 138 449 MAP Kinase Gene Family AT1G73670 36.391 1.30e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mibi11g1875 Pkinase 4.5e-65 CL0016