Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1866 ATGTTCAACAATAGTGCTGTTAAGCTAAATACAGAAGATGGAGAGCAAGTGGTGATTGACAATGGCATCGTTCAACTCACTCTTTCTACACCTCAAGGCTATGTTATTGGAATCTCGTACCATGGAATCGACAACGTCCTAGAAACTAGTCACTCACTATATGACAGAGGGTATTTTGATGTTGTTTGGAACGAACCAGGAAAGAATAGTATTACTCAAAGAATCAATGGGACCCATTTTTCAATTGTAGCATCGGACGAGAGCCACGTGGAGGTTTCGTTTGTAAGAACATGGACATCCTCAATGCAAGGCACTGATGTGCCCATTAACATAGACCAAAGGTATGTATTGCGACGAGGCAGCTCTGGATTTTACTCTTATGTGATTTTCGAGCGTCCACCAGGATTTCCAGCTTTGGAGGTTGATCAAGTCAGGATTGTCTACAAACTCCAAGAACAAAGGTTTAATTATATGGCAGTATCAGAGAATAGGCAAAGATTCATGCCAAGCATGGAAGATAGAGAGAGTGGGCAAGCCCTGGCTTATCCTGAAGCTGTTCTCTTAACCCATCCATCCAACAAAGACTTCAAAGGAGAGGACGACAAATATCAATACTCATGTGAGAACAATGACAACAGAGTGCATGGTTGGATTAGCTTTGATTCAGATGCACCTGTAGGCTTCTGGATGATAACGCCTTCCAACGAGTTTCGCAATGCTGGGCCCACTAAGCAAGACCTCACCTCTCATGTTGGCCCCTTTACCCTTTCGGTATGA 777 0.4337 MFNNSAVKLNTEDGEQVVIDNGIVQLTLSTPQGYVIGISYHGIDNVLETSHSLYDRGYFDVVWNEPGKNSITQRINGTHFSIVASDESHVEVSFVRTWTSSMQGTDVPINIDQRYVLRRGSSGFYSYVIFERPPGFPALEVDQVRIVYKLQEQRFNYMAVSENRQRFMPSMEDRESGQALAYPEAVLLTHPSNKDFKGEDDKYQYSCENNDNRVHGWISFDSDAPVGFWMITPSNEFRNAGPTKQDLTSHVGPFTLSV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1866 258 Gene3D - 9 255 IPR014718 GO:0030246
Mibi11g1866 258 Pfam Rhamnogalacturonate lyase family 7 199 IPR010325 -
Mibi11g1866 258 CDD RGL4_N 10 258 - -
Mibi11g1866 258 SUPERFAMILY Galactose mutarotase-like 11 250 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mibi11g1866 258 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 9 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1866 Mibi-ChrMibi11 40300343 40307591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1866 6 258 Polysaccharide Lyase AT2G22620 58.268 4.84e-104 308