Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1847 ATGGAGGAGTACCACGAGAGCAACAAGAAGAAGGAACTATTCTCAAGTGCCATGAAAGGAGAATGGGACAAGGTCATTGGAATGTACAAGGAAGATGCAAGTCTTCACAACGCCAGAATCACTCGCTCTGAACAGACTGCGCTGCACATAGCAGTCTCTGATGGGAAGGAGCACATAGTAAGTCGCATGCTCCAAGCCATGATGCAGGGACAACGAAATCAAAAGGAACTTGTTGTAAATGCTTTGCGAACTGGTAATCGTAGAAATAACACTGCCTTGCATTCAGCAGCTTCCATGGGCAATGTTACCATATGTCGCCTGATTGCCGGCATGGACGCTACTTTAGTGGATGATCGTAACAATGACGGCGAAACTCCTCTCTTCTTGGCCGCTCTCTATGGCAGAAAACAAGCTTTTCTTTTGCTTCATAGCATCCGAAACCCTGACATCACTGCTCCTCCCTTCTATGTTAACTGTAGAAGGAATAATGGTGACACTATTCTTCACTCTGCAATCAACGGTGACTACTTTGCTGTAGAACACAGGCAACCTCACGTGTATCAGTTCTTGCTGAAGAATAATGTTTACAAGGAGAGCCTATTCCATCAGTTGGATAAAGATGGAAACAGTGCGTTGCATTTGGCAGCCAGATATGGTGACAACAAGCCTTGGCTCATTCCTGGCGAAGCTCTTCAAATGCACTGGGAATACAAGTGGTACAAGTTTGTGAAAGAGGCAATGCCACCTAATTTCTTTGGCCGATACAACAATAAGAAGGAAACCGCACATGCTGTCTTCACCAAAACTCACAAGCAGCTCGAGAAAACTGCGGCCGATTGGCTGAACAAAACCTCAGAATCATGCTCGGTGGTGGCGGCACTAATTGCCACGGTGGCCTTCACCACGGCGTCCACTGTGCCCGGCGGAGTCAGACAAGAGATTGGCCACCCAGACAGTGGCCACCCAATACTTGAAGATAAGCCAGAGTTCCAACTGTTTGCCATCTCAGCAATCCTGGCCCTGGGCTTCTCCATAATGGCCTTGGTCATGTTCCTATCTATACTTTCTTCTCGATTTCAAGAGCAAGACTTCGAAAACTTGCCCAGGAAGTTACTGGTTGGTTTGACTTCCCTGTTCATATCGATTACTTCCATGTTGGTGTCGTTCTGTGCTGGACATTTCTTCGTGCTCGAGGATGAACTTCATTTTCTTTCTCTTCTAATATACGGGAACGAAGGCGCGCATGCCGACTTGGCCGGGACAATGGTTTTAGGGGCAGCGGGAATCGCCGCCGGCAACAGCATCGCCGTCTCTTTAAGTGAAGTTACCAATATGGAGATTCCTCATCTAAACCGTCTCGCCCACCATTCCTCTTGGACAAGAGTGTACACTGGCATGAGGACTCAACCTCATCGTATCACAAAGGTATTCTTTTGCCAGGCCAAAAATGATGGGTCATTAAAGTCGGTACCTCCAACCCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCCTGTTTTTGAAGAAACAAGGCTTGAGTAATGCAGTTGCAGCAAGAACCATCAACAAGTCAGATGTTTTCATTGATCACCTTGTATCAAAGATTCACTCTAAACATAAATCTCGGTACCTCGTAGGGAGAGAACTTACAACTCTTGAGATTAGAGATGCTTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTTGTGGAAAGCTATCCAAACCCTCCAGATAAGGAAAAGCCTACAGTGCCCATTTCTATCCCTAGCTCATTGGTGGAATCCAAGAAGACAAAATCCATGTCTCGAGTGAGTGAAATAGACCCAGCTGGCAAGCTTCGTCCTCATATTGTTTATCTTTTGGAGCTTGGCATGAATATTGAGCAAATCAAGAGTATTACTCGAAGATTTCCTTCTTTCGCTTATTATAGCTTAGAAGGAAAAATCAAACCAGTTGTTGAGTTCTTTTTAGAACTTGGCGTTCCAAAAGAAGATATTCCTATCATTATCACTAAAAGGCCTCAGTTATGTGGTATCAGCCTCTCTGAGAATCTTAAACCCACCATGAAGTTCATGGAAACCTTGGGTGTGGACAAGCAGCAATGGGCAAAGGTGATATACAGATTTCCAGCTCTTCTAACTTACAGCAAGCAAAAGGTGAAAACAAGTATAGATTTCCTCTATGAAATAGGCCTCTCAGAGGAGAACATAGGTAAGATCATAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAGGACAAGCTAAGACCAACAGCAAATTACTTCCGTTCCTTGGGAGTTGACGTTGGCATTCTTCTATTTCGATGTCCGCAAAATTTTGGTCTTAGCATTGAGGCCAATCTAAAGCCTGTAACTGAATTTTTCTTAGAGAAAGGATACACAGTACAGGAAGTTGGGACTATGATTTCAAGATATGGATCATTGTATACTTTTAGCTTGGCTGACAATTTGATTCCAAAATGGGAATTCTTTGAGACCACGGACTACCCCCAATCAGAGCTGGTTAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACCAAGATATGCTCGAATGGAAGAGTGCAGAGTGAAGTTGCTGCTAAATCAGCTTCTGTCTCTGTCAAGTACTGACTTTGAGGAGGCCTTGAAAAAGAAAATGATGAAGGTGCAGCTTGACCAGGATTCTAGTTGTGGTGCTGAAAATGGTCAACCAGACAATGCAAAATGA 2775 0.4396 MEEYHESNKKKELFSSAMKGEWDKVIGMYKEDASLHNARITRSEQTALHIAVSDGKEHIVSRMLQAMMQGQRNQKELVVNALRTGNRRNNTALHSAASMGNVTICRLIAGMDATLVDDRNNDGETPLFLAALYGRKQAFLLLHSIRNPDITAPPFYVNCRRNNGDTILHSAINGDYFAVEHRQPHVYQFLLKNNVYKESLFHQLDKDGNSALHLAARYGDNKPWLIPGEALQMHWEYKWYKFVKEAMPPNFFGRYNNKKETAHAVFTKTHKQLEKTAADWLNKTSESCSVVAALIATVAFTTASTVPGGVRQEIGHPDSGHPILEDKPEFQLFAISAILALGFSIMALVMFLSILSSRFQEQDFENLPRKLLVGLTSLFISITSMLVSFCAGHFFVLEDELHFLSLLIYGNEGAHADLAGTMVLGAAGIAAGNSIAVSLSEVTNMEIPHLNRLAHHSSWTRVYTGMRTQPHRITKVFFCQAKNDGSLKSVPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDVFIDHLVSKIHSKHKSRYLVGRELTTLEIRDALIPYLESLFEEYGDILMDFVESYPNPPDKEKPTVPISIPSSLVESKKTKSMSRVSEIDPAGKLRPHIVYLLELGMNIEQIKSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKEDIPIIITKRPQLCGISLSENLKPTMKFMETLGVDKQQWAKVIYRFPALLTYSKQKVKTSIDFLYEIGLSEENIGKIITRFPNIISYNVEDKLRPTANYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTEFFLEKGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFETTDYPQSELVKFPQFFGYSLEERIKPRYARMEECRVKLLLNQLLSLSSTDFEEALKKKMMKVQLDQDSSCGAENGQPDNAK 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1847 924 SUPERFAMILY Ankyrin repeat 13 220 IPR036770 -
Mibi11g1847 924 Pfam Ankyrin repeats (3 copies) 78 144 IPR002110 GO:0005515
Mibi11g1847 924 Pfam mTERF 739 895 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 Pfam mTERF 631 809 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 Gene3D Transcription termination factor 3, mitochondrial 597 688 IPR038538 -
Mibi11g1847 924 Gene3D Transcription termination factor 3, mitochondrial 689 905 IPR038538 -
Mibi11g1847 924 SMART ANK_2a 43 74 IPR002110 GO:0005515
Mibi11g1847 924 SMART ANK_2a 88 117 IPR002110 GO:0005515
Mibi11g1847 924 SMART ANK_2a 163 199 IPR002110 GO:0005515
Mibi11g1847 924 SMART ANK_2a 122 152 IPR002110 GO:0005515
Mibi11g1847 924 SMART mt_12 748 779 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 849 880 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 713 743 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 817 848 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 605 636 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 677 708 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 641 672 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 SMART mt_12 781 812 IPR003690 GO:0003690|GO:0006355
Mibi11g1847 924 PANTHER CASKIN 40 409 - -
Mibi11g1847 924 Pfam Domain of unknown function 279 395 IPR026961 -
Mibi11g1847 924 Gene3D - 1 233 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1847 Mibi-ChrMibi11 40025826 40033273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1847 90 410 Miscellaneous Gene Families AT1G34050 24.791 8.48e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi11g1847 mTERF 1.4e-32 No_clan