Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1826 ATGGCCTCGCAGGCTTCATGTTCAGACGAGAACAAGGATTTGGCGCAGAGAGTATCGGATAAGGTTTCTGCTTTGTACAAGTCTCTTCCCAAGAAAGGCAAACCTCAAGGGCGCGAAGTCACCGTTTTGGCCGCTTTCCTTCTTTCTTCTCCCTCCAATGATTTGGAGGTTGTTTCTCTAGGAACAGGAACCAAGTGTATTGGCCGCTCACTTTTGCGCCCTTTTGGTGATGTTGTCCATGATTCTCATGCTGAGATTATATCACGAAGAGCTTTGTTAAGGTTCTTCTATACACAGATTCAACATCTTACTGAAACTTAGGCTGCGGTGGCTGTATCTATGGTGGCCAAAGAAGATGCCCGTGTCGACTGCAACCGCCGCTACCATCGTCGTCATCCTCTTATGCTTTGTAGCCACTCTATTATCTTCTTCTGGTGGCAGGATGTGACAGCTACTAAAGGAAATGAATTTGAAGACTACTTTTTGAAGCGTGAACTGCTTATGGGAATATATGAGAAGGGTTTTGAAAAACCTTCTCCAATCCAGGAAGAAAGTATCCCAATTGCTCTTACTGGTAGTGACATTCTTGCTAGAGCTAAAAATGGAACTGGAAAAACAGCTGCCTTTTGCATCCCTGCACTAGAAAAAATTGATCAGGATAACAATGTTATTCAAGTTGTTATACTGGTCCCAACACGTGAACTGGCTTTGCAAACATCCCAAGTGTGTAAAGATCTGGGAAAGCATCTGAAAATTGAAGTCATGGTTACGACTGGTGGTACCAGCTTGAAAGACGATATCATGCGATTATATCAACTGAAAGACGATATCATGCGATTATATCAACCTGTTCATTTACTTGTTGGAACTCCTGGAAGAATATTAGATCTTGCAAAGATGGGTGTCTGCATCTTGAAAGACTGTAGTATGCTTGTGATGGATGAGGTAAATATCTTCACCTAG 963 0.4268 MASQASCSDENKDLAQRVSDKVSALYKSLPKKGKPQGREVTVLAAFLLSSPSNDLEVVSLGTGTKCIGRSLLRPFGDVVHDSHAEIISRRALLRFFYTQIQHLTETXAAVAVSMVAKEDARVDCNRRYHRRHPLMLCSHSIIFFWWQDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKDLGKHLKIEVMVTTGGTSLKDDIMRLYQLKDDIMRLYQPVHLLVGTPGRILDLAKMGVCILKDCSMLVMDEVNIFT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1826 320 Gene3D - 144 319 IPR027417 -
Mibi11g1826 320 ProSiteProfiles Adenosine to inosine editase domain profile. 59 101 IPR002466 GO:0003723|GO:0004000|GO:0006396
Mibi11g1826 320 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 272 318 - -
Mibi11g1826 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 317 IPR027417 -
Mibi11g1826 320 Pfam DEAD/DEAH box helicase 180 316 IPR011545 GO:0003676|GO:0005524
Mibi11g1826 320 CDD DEADc_DDX6 157 315 - -
Mibi11g1826 320 SMART ultradead3 174 320 IPR014001 -
Mibi11g1826 320 Pfam Adenosine-deaminase (editase) domain 59 113 IPR002466 GO:0003723|GO:0004000|GO:0006396
Mibi11g1826 320 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 155 183 IPR014014 GO:0003724
Mibi11g1826 320 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 186 320 IPR014001 -
Mibi11g1826 320 SMART adara_8 13 320 IPR002466 GO:0003723|GO:0004000|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1826 Mibi-ChrMibi11 39642185 39646825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1826 116 317 Eukaryotic Initiation Factors Gene Family AT3G13920 35.468 1.05e-29 115