Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1812 ATGGATCGGGGGGACCAAATGGCGTTATCTGGGTCTGCATCTTACTATATGCAGAGGGGGATGGCTGGTTCTGCCGGACAGCCTGATCTTCATGGTTCGCCAACTATGCACCAACTGTCTAATTCCAATCTATCATTTCAACCCAACATTGGAGGTGGTACTCTTGGATCCTCGCTACCACTAGAATCTTCAGCCATTTCGCCTCATGGTGTCAATGTAGGCGCTCAATCAGCAGGGCCGTCTGGGGAATCTGTCAAAAGGAAGAGAGGTAGGCCTAGGAAATATGGTGCAGATGGAAATGTGTCATTGGCATTGACTCCATTGTCGTCTAATCATCCCGGAAGTGGTCAGTCCGGTAGCGGAACTGTGACGCAGAGCCATAAGAGGGGTAGAGGGCGCCCACCCGGGAGTGGCAAGAAACAGCAGTTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGAATGGGTTTCACTCCTCATATCATCACCATTGCAGTTGGAGAAGATATTCTGTCAAAAATAATGGCATTCTCCCAGCAAGGGTCTAGAGCTGTGTGTGTATTGTCGGCCAGTGGTGCTGTTTCAAATGTGACGCTTCGTCAGCCTTCGACTTTGGGTGGTTCTGTCACATATGAGGGCCGTTATGAGATATTGTGCCTGTCTGGCTCTTACTTGCTTAATGAAAGTGGTGGCTCTCGCAATCGATCTGGCGGATTGAGTGTCTCCCTTGCTAGTCCTGAGGGTAAAATCATTGGTGGAGGAGTCTGTGGAATGCTTATTGCAGCATGTCCTGTTCAGGTAATAATTGGGAGCTTTTTATGGGGTGGATCGAAAACCAAGAACAAGAAAAAGGAAGTTGATGAAGTTCCTGTGGAGTCAGATCATCAGGATCATCAGGCAGTTCACAACCCAGTTGCTATGAATAACATTATGTCCAATCAGAGTCTCACCCCACCATCTTCTATGGGTACATGGGCGGCATCTCGTACGATGGACATTCGCAATTCCCATGTTGACATTGATTTGATGCGTGGGTGA 1041 0.4841 MDRGDQMALSGSASYYMQRGMAGSAGQPDLHGSPTMHQLSNSNLSFQPNIGGGTLGSSLPLESSAISPHGVNVGAQSAGPSGESVKRKRGRPRKYGADGNVSLALTPLSSNHPGSGQSGSGTVTQSHKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDILSKIMAFSQQGSRAVCVLSASGAVSNVTLRQPSTLGGSVTYEGRYEILCLSGSYLLNESGGSRNRSGGLSVSLASPEGKIIGGGVCGMLIAACPVQVIIGSFLWGGSKTKNKKKEVDEVPVESDHQDHQAVHNPVAMNNIMSNQSLTPPSSMGTWAASRTMDIRNSHVDIDLMRG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1812 346 MobiDBLite consensus disorder prediction 103 127 - -
Mibi11g1812 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 68 321 IPR039605 GO:0003680
Mibi11g1812 346 CDD DUF296 159 273 IPR005175 -
Mibi11g1812 346 ProSiteProfiles PPC domain profile profile. 154 295 IPR005175 -
Mibi11g1812 346 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Mibi11g1812 346 SMART AT_hook_2 128 140 IPR017956 GO:0003677
Mibi11g1812 346 MobiDBLite consensus disorder prediction 20 143 - -
Mibi11g1812 346 Gene3D - 160 300 - -
Mibi11g1812 346 MobiDBLite consensus disorder prediction 31 71 - -
Mibi11g1812 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 275 - -
Mibi11g1812 346 FunFam AT-hook motif nuclear-localized protein 1-like 160 290 - -
Mibi11g1812 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 160 273 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1812 Mibi-ChrMibi11 39573862 39579294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1812 1 346 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 48.257 4.98e-88 267