Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1809 ATGGGGATTCAGTGCTCCAGACTCTTGCCATGTTGTGCGAATTCTCAAGTAAAGGCTTCCATTCTTGAAGTTCCAGATACTGAAAAGGAGGATAGAACTGAGGCCAATAATTGGCCTGCATTCCGTGAATTTTCATTGGAACAACTAAAGAATGCAACATCTGGCTTTGCTGTTGAGAATATTGTATCTGAACACGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGGCCGGCAGTTTTTGGAGGAAGCAAGATCTGTTGGTGAACTCCGCAACCAGCGATTAGCAAATTTGATTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCAGAATTTATGCCAAATGAGACTCTTGCAAAACATCTTTTCCATTGGGAAACACAACCTATGAAGTGGGCAATGCGATTAAGAGTTGTTTTCCATCTTGCACAAGCTCTAGAATATTGCACAGGAAAAGGGCGAGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGATGGCAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGAGATGGGAAAAGTTATAGCACAAATTTGGCTTTCACCCCTCCAGAATATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGTTTCGGCACTCTTCTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCTAGCCATGCCCTTGATTTAATTCGGGACAGAAATCTTCAAATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGACGATGGAACTGAGTTAGTACGCTTGGCATCTCGATGCTTACAGTATGAACCTAGAGAAAGGCCAAATCCTAGATCATTAGTGGCTGCCTTGGCACCTCTTCAAAAAGATACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGACGCTACTTTTGCTTCATTGTCCCCACTTGGTGAAGCATGCTCGAGAAAGGATTTGACTGCCTTACATGAAGTTCTGGAAAATATTGGTTATAAAGACGATGAAGGAGTGACAAATGAGTTATCTTTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGACGTTGCTTTCCAGCAGAAGGATTTTAGAGTTGCAGTGGAGTGCTACACACAGTTCATCGATGGTGGAATAGTGGTTTCTCCAACCGTCTATGCACGGCGAAGTTTGTGCTATCTGTTTGGTGACATGCCCCAAGAAGCACTGAACGATGCAATGCAGGCACAAGTCATATCCCCAGTATGGCACTTAGCATCATACCTTCAATTTCTTGCTCTCTCTGGACTTGGAATGGAGACTCAAGCTCAAGTAGCACTCAAAGAGGGCACAGCCTTGGAAGCCAAAAGAAGTGAAACTTCTGGGCACAAGTGA 1479 0.432 MGIQCSRLLPCCANSQVKASILEVPDTEKEDRTEANNWPAFREFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELRNQRLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKDTEVSSHVLMGIPHGDATFASLSPLGEACSRKDLTALHEVLENIGYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVAVECYTQFIDGGIVVSPTVYARRSLCYLFGDMPQEALNDAMQAQVISPVWHLASYLQFLALSGLGMETQAQVALKEGTALEAKRSETSGHK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1809 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 486 IPR045845 GO:0004672|GO:0009742
Mibi11g1809 492 SUPERFAMILY TPR-like 385 487 IPR011990 GO:0005515
Mibi11g1809 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Mibi11g1809 492 SUPERFAMILY Protein kinase-like (PK-like) 36 317 IPR011009 -
Mibi11g1809 492 Gene3D Tetratricopeptide repeat domain 381 491 IPR011990 GO:0005515
Mibi11g1809 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1809 492 FunFam probable serine/threonine-protein kinase At4g35230 381 490 - -
Mibi11g1809 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Mibi11g1809 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Mibi11g1809 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Mibi11g1809 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1809 Mibi-ChrMibi11 39544177 39548999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1809 30 331 Glycoside Hydrolase AT3G07070 33.636 1.26e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mibi11g1809 PK_Tyr_Ser-Thr 1.6e-26 CL0016