Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1785 ATGATTGGTAATGGGAAGTCAGTGGATTTGTATAAGATCTTCAAGGTGGTTAAGGAGAATGGTGGGTATGATGCAGTCTCCAAAAACCGTTTATGGGATCTGGTGGGTGAAAAATCTGGGTTGGGTGCGAGAATTGGTTCATTTGTGCAACTGATTTACGATAAGTACTTGATTACTTTAGAGATATGGCTAAAGCAAGCTGCTGATAATAAGGCCTCTGACTGTAGTCTGGAGTTTAACAGGGTTGATTTTGGCAGGCATTTGATGGAGTTGCACGCGGAGTTTGAGGGGTCCTTGTTCGATTCTACTGATGAAGAGTTGGGAGATGAGATGTGTCAGCATTCAGAGTTTAACACTGAATATAAATCTCAGGATGGTGAGGTGTTCTTTGATGCTAAGGGAGTGAAGAGCAGGTCAGGAGGGGCCAAAAAAGTTCAGGATGGAGGGTTTATTGATTTGAATATACCAGGGGTTGAGTTGAATGGACTCTCAACACCAATCGAGTTGAATGAACTCAGTTCAGGAAAGTTGTGCTTTAAGAGTGAGGTAAACAAAATGCCCATGTTATCGAATGGAGACAAGGGATGTGCCAATGGTGATGATGTTTTGGCATTGGACCCATCTGATGTAAACAAAGATAGCTTTAATCGCAAAAGGAAGAGGGACTCTATGCAGGAAATGCTAAGCTGGTTGACTGGCACTGCAAAGAATCCCTGTGATCCCGTTGTTGATCGGGTACCTGACAAATCTAAGTGGAGGTCTCACAGCAATGAGAAGGTCTGGAAGCAGATTTTGTTGTATCGGGAGGCCACATTTCTGAAGCGACATGCGGACTCAAGCAGCGAACAACTGAATTGGCAGAGACAAAAGATGCATCCTTCCATGTATGAAGATCAGCTTGAGGCAACGTACAATCTTAGGGAGAGGTGGAAGTGTGCCAAGAAGCTTTTATTTGAAAAATCTAAGTCTGCAAGAGTTTCTTCAGATTCATCCATGGAAACCAAGGGTAATCTGGAGAGAACTTCTAGTTCTCACAGTGAAAATTCTGCTGAGAAAAAGCTGTGTGATTCCTCCACTCCACCATCAGGCCTTGACAAATGTGACATGGTTCCCATCCCTCTGGGGCCCAGTCATCAAGCCAAAGTACCAGATTGGACTGGCATGACTTCTGAGAGTGATTCCAAGTGGTTGGGGACCCGAATATGGCCTTCAGAGAAAGTGAATCACAGACTACTGATTGAGAGGGACCCCATTGGAAAGGGAAGACAAGATTCATGTGGCTGTGAAGTACCAGGTTCTGTTGAATGTGTCCGATTTCATGTTGCTGAGAAAAGGGCTAAGGTGAAGCTGGAATTAGGTGTGGCTTTTTACCTATGGAAGTTAGACAAGGTAGGTGAAGATGTTAGGCGATCATGGACAGGGGATGAAGAGAAGAAGTTTAAGGATGTGGTGCAATCAAATCCTCCTTCACTAGAGAGATGCTATTGGGAGCATATTTTTAAATCATTTCCTAAGAAGACCAGGGAAGATTTGATTAGCTACTATTTTAATGTCTTTCTTTTGCAGCGCCGAGGATATCAGAACAGGAATACTCCAAATGAAATTAATAGTGATGATGACGAATCAGAATATGGACCTTTGAGGACTGTTTTTGGACAGCAATCACAGAATCCAACCAGTTCCATCTTACTGACCCCCAAAAAGTCCCAGACAAAGAAGACATAG 1725 0.4342 MIGNGKSVDLYKIFKVVKENGGYDAVSKNRLWDLVGEKSGLGARIGSFVQLIYDKYLITLEIWLKQAADNKASDCSLEFNRVDFGRHLMELHAEFEGSLFDSTDEELGDEMCQHSEFNTEYKSQDGEVFFDAKGVKSRSGGAKKVQDGGFIDLNIPGVELNGLSTPIELNELSSGKLCFKSEVNKMPMLSNGDKGCANGDDVLALDPSDVNKDSFNRKRKRDSMQEMLSWLTGTAKNPCDPVVDRVPDKSKWRSHSNEKVWKQILLYREATFLKRHADSSSEQLNWQRQKMHPSMYEDQLEATYNLRERWKCAKKLLFEKSKSARVSSDSSMETKGNLERTSSSHSENSAEKKLCDSSTPPSGLDKCDMVPIPLGPSHQAKVPDWTGMTSESDSKWLGTRIWPSEKVNHRLLIERDPIGKGRQDSCGCEVPGSVECVRFHVAEKRAKVKLELGVAFYLWKLDKVGEDVRRSWTGDEEKKFKDVVQSNPPSLERCYWEHIFKSFPKKTREDLISYYFNVFLLQRRGYQNRNTPNEINSDDDESEYGPLRTVFGQQSQNPTSSILLTPKKSQTKKT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1785 574 Gene3D - 1 75 IPR036431 GO:0003677
Mibi11g1785 574 SMART ELM2_2 372 423 IPR000949 -
Mibi11g1785 574 SMART sant 468 521 IPR001005 -
Mibi11g1785 574 MobiDBLite consensus disorder prediction 323 362 - -
Mibi11g1785 574 MobiDBLite consensus disorder prediction 548 568 - -
Mibi11g1785 574 SMART bright_3 2 66 IPR001606 GO:0003677
Mibi11g1785 574 Pfam Myb-like DNA-binding domain 469 518 IPR001005 -
Mibi11g1785 574 MobiDBLite consensus disorder prediction 529 574 - -
Mibi11g1785 574 MobiDBLite consensus disorder prediction 323 344 - -
Mibi11g1785 574 CDD ARID 4 61 - -
Mibi11g1785 574 SUPERFAMILY ARID-like 4 71 IPR036431 GO:0003677
Mibi11g1785 574 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 571 - -
Mibi11g1785 574 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Mibi11g1785 574 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Mibi11g1785 574 CDD SANT 471 519 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1785 Mibi-ChrMibi11 39293314 39296915 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi11g1785 ARID 8.5e-08 CL0123