Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1784 ATGTCCCTCCTTTCTCCTCCTCCCTCTTCCTTCTTCATACCCTTCTCTTTCTTCTTCCTCTCCCTCCTTGCTTTTTCCTCTTCTCAACCCATTCCTTCCACCAGAGGCAGAAAACTGCAGGCAAATCGTGTTCTTATAAGAGGAAAGGAGACATTGTCCAGTGAGAATGGCACATTCCAGCTTGGCTTCTTTAGCTTCAATGTCGAACAACCCAACTATTACTTAGCTATCCGTTACGCTTCCATCCCTCTTCCCACCTACGTCTGGGTCGCTAATCGCGAAAAACCCACCAAAAATCTCGCCCATTCAACACTAGAACTCACCTCAACAGGCCTCCTTGTTGTCAAAGACTCACCAAGTTCAATCCTTTGGCAAAGCACAAACTTAGAATCCTCAGATTCTTCAGAATTAAAGCTTTTAGAGAACGGGAATTTAGTTCTCCTCACTCGGGTTAACTCTATTTCATGGCAAAGCTTCGATTTTCCCACAGATTCTTGGCTTCCAGGAATGAATCTCACCAGAAATCGATTCTTGGTCTCATGGAAAAGCCCCACAGACCCTTCACCGGGATTGTATTCTCTACGGTTGAGACCACCGGGTTATGGTGAGTTCGAGCTTCTCTTCAATAACACAAAATCTTACTGGACCACAGGAAGATGGACCGGCGATTCATTTTCCAACATACCAGAGATGACGATTCCGTACCTTTATCTCTTCGACTTTGTGAATCCATTCACTCCAACGGCGTCGTTTGGGTTTAAGGAGAAGCCTCTGAATGGGATGACCCCACCGACGTATTTCAAGGTTGAACCTCATGGTCAGGTAAGGCAGTTCACATGGTGGTCTCAGACAGGAAGCTGGAATATCTTCTGGTCTGGGCCCAAGAATGCTTGTGATGTTTATGGCTTGTGTGGTAGCTTGGGGATATGTAATGGTGAAATGACTCCTATGATGTGTGAGTGTGTTACTGGTTATAAGCCATTTGATGATGGTAGATGGGTTTCTGGTGATTACTCTGGCGGGTGTCGTAGGGAATCTGATGGTGAATGTCATAAAAGTGATGGGTTTGTTGATATGGGTGTTATGAGCCTTGATGCAACCAATGTGGATTCATTTCAAACCAAATCTAGAAGTAGTTGTAAGAATTATTGTTCGCGTTCATGTGATTGTGTTGGTTTGTCTTTCAATGAGAGGACCAGTTCCTGCAAGAATTTTTATGGGTCAATTCTGAATCTGCGTAATTCATCTGATGATGGAAGTTTTATTGATGGTAACTTGTTTGTTAGGGTGCAGCGAGGGGGTGAATCTGTGAAGAAACAGAATCGGCAGATTCTGACTGGTTCTATCATTGGGGCAATTGTTTTTGTGGGGTTAGTAGTGGTGACACTGTTGGTATTGCTGAATCGAAGGCGGAGGAAGAAGAAACTAGAAGAAGATGGGTTGATTCCTGTTTTGTATCTTAAGTTATTTTCCTACAAAGAGCTTCAATTAGCGACTAGGGGATTCTCAGAGAAAGTTGGTCATGGAGGTTTTGGGACAGTATTTCAAGGAGAATTACCAGATTCAACTCTTGTTGCTGTGAAGAGACTGGAAAGACCTGGTGGTGGAGAAAAAGAGTTCAGAGCAGAAGTTTCCACCATTGGTAATATCCAACATGTTAATCTTGTTAGACTTAGAGGATTTTGCTCTGAGAATTCTCACAGGCTTCTGGTTTATGAGTTCATGCCCAAAGGTGCTCTTAGTTCTTACCTTCGTAAAGAAGGAGGGCCTAGTCTGAGTTGGGATGTTAGGTTCCGAATTGCGGTCGGAACAGCCAAAGGAATTGCTTACTTGCACGAAGAATGTAGAGATTGTATCATCCACTGTGATATCAAACCTGAAAACATCCTCTTGGACACAGATTTCACTGCCAAAGTTTCTGATTTCGGATTAGCCAAGCTCATGGGGAGGGATTTCAGTAGGGTTTTAGCAACAATGAGAGGCACTTGGGGTTATGTAGCACCAGAATGGATTTCTGGTGTAGCAATCACAACAAAAGCCGATGTTTACAGCTATGGAATGACATTGTTGGAATTGATCAGTGGTCGCCGGAATGTGGAGGCACCACCACAATCAGGTGGTGGCGTGGAGGAGGCCGGAGAAAAAGAGAAATGGTTCTTCCCTCCGTGGGCTGCACGGCATATAATTGAAGGGAATTGGGCTGCAATACTTGATAGAAGGCTTGGGAACGCATATATCATGGAGGAGGTAAAGAGGGTGGCTATGGTGGCTGTGTGGTGTATTCAGGATGATGAAGGAAGTAGGCCTCCAATGGGGATGGTGGTGAAGATGTTGGAGGGGTTAGTGCAAGTAAGTGTCCCTCCTGCGCCTAAATTGCTTCAGGCGTTGGTCTCCGGCGAGTCATTTCGAGGACTCTCCGGCGGTGGCAATGCTGATACAGAATCATTCACTGGGGGCTTTTCTTCCTCCCCAGCAGCTAATAGGAATTTCAATGTTGTTGTACAATGA 2508 0.4494 MSLLSPPPSSFFIPFSFFFLSLLAFSSSQPIPSTRGRKLQANRVLIRGKETLSSENGTFQLGFFSFNVEQPNYYLAIRYASIPLPTYVWVANREKPTKNLAHSTLELTSTGLLVVKDSPSSILWQSTNLESSDSSELKLLENGNLVLLTRVNSISWQSFDFPTDSWLPGMNLTRNRFLVSWKSPTDPSPGLYSLRLRPPGYGEFELLFNNTKSYWTTGRWTGDSFSNIPEMTIPYLYLFDFVNPFTPTASFGFKEKPLNGMTPPTYFKVEPHGQVRQFTWWSQTGSWNIFWSGPKNACDVYGLCGSLGICNGEMTPMMCECVTGYKPFDDGRWVSGDYSGGCRRESDGECHKSDGFVDMGVMSLDATNVDSFQTKSRSSCKNYCSRSCDCVGLSFNERTSSCKNFYGSILNLRNSSDDGSFIDGNLFVRVQRGGESVKKQNRQILTGSIIGAIVFVGLVVVTLLVLLNRRRRKKKLEEDGLIPVLYLKLFSYKELQLATRGFSEKVGHGGFGTVFQGELPDSTLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMPKGALSSYLRKEGGPSLSWDVRFRIAVGTAKGIAYLHEECRDCIIHCDIKPENILLDTDFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELISGRRNVEAPPQSGGGVEEAGEKEKWFFPPWAARHIIEGNWAAILDRRLGNAYIMEEVKRVAMVAVWCIQDDEGSRPPMGMVVKMLEGLVQVSVPPAPKLLQALVSGESFRGLSGGGNADTESFTGGFSSSPAANRNFNVVVQ 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1784 835 FunFam Receptor-like protein kinase 4 463 574 - -
Mibi11g1784 835 CDD B_lectin 43 162 IPR001480 -
Mibi11g1784 835 Pfam Protein kinase domain 503 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1784 835 FunFam S-receptor-like kinase 5 575 787 - -
Mibi11g1784 835 ProSiteProfiles PAN/Apple domain profile. 350 426 IPR003609 -
Mibi11g1784 835 Gene3D Transferase(Phosphotransferase) domain 1 575 786 - -
Mibi11g1784 835 Gene3D - 33 159 IPR036426 -
Mibi11g1784 835 SMART serkin_6 500 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1784 835 SUPERFAMILY Protein kinase-like (PK-like) 483 779 IPR011009 -
Mibi11g1784 835 Pfam S-locus glycoprotein domain 215 327 IPR000858 GO:0048544
Mibi11g1784 835 PANTHER OS07G0415500 PROTEIN 13 791 - -
Mibi11g1784 835 Gene3D Phosphorylase Kinase; domain 1 465 574 - -
Mibi11g1784 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Mibi11g1784 835 Pfam D-mannose binding lectin 86 182 IPR001480 -
Mibi11g1784 835 PIRSF SRK 8 825 IPR024171 GO:0004674
Mibi11g1784 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 220 IPR036426 -
Mibi11g1784 835 ProSiteProfiles Protein kinase domain profile. 500 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1784 835 CDD STKc_IRAK 506 781 - -
Mibi11g1784 835 SMART blect_4 43 162 IPR001480 -
Mibi11g1784 835 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Mibi11g1784 835 ProSiteProfiles Bulb-type lectin domain profile. 37 160 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1784 Mibi-ChrMibi11 39257553 39260060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1784 442 798 Receptor kinase-like Gene Family AT4G18250 38.356 1.36e-75 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi11g1784 Pkinase 3.1e-45 CL0016