Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1783 ATGGGAGGTTGCTGCTGCAGTGCCAGAAAACCTCATCTGCATGGAACGCCAGTTTATATCTATTGTCCACCAGCTTTGGAAGAGCATGAGTCTTTAACTACTAATGATGTTACTGCTGCTTCACTCACTGCCGGATTGCTGGTGAGTTTGGACCTTCAGGGATCAACACCTGATACTTACCGGCCCCCTCCTGCACCATTGCCATATGATACGGTTTTGGGTTGTCCAGCATCAACTGATTCTGAGTCAGGCAGAGAAACAATAAGTGGCAGTAGCTTTGCAACCTTACTTACATGTGAAGATATTGAAGACTCAGAATGCAAAGTTCAAGCTAATTCTATGCCTGCGTCCCCAAGGAAGCCAGAACTAACTAAGCCAAATGAATCTCATGTATTAGTGACAGAGGAAGAGGATGGTTGCCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTGACCAAATGTGAACACCACTTTCACCTATCTTGCATTCTTGAGTGGATGGAACGAAGTGACTCTTGTCCCATATGCGATCAGGAGATGATCTTTGACCATACACTGAATTAG 576 0.441 MGGCCCSARKPHLHGTPVYIYCPPALEEHESLTTNDVTAASLTAGLLVSLDLQGSTPDTYRPPPAPLPYDTVLGCPASTDSESGRETISGSSFATLLTCEDIEDSECKVQANSMPASPRKPELTKPNESHVLVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDHTLN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1783 191 SUPERFAMILY RING/U-box 134 187 - -
Mibi11g1783 191 SMART ring_2 140 180 IPR001841 -
Mibi11g1783 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Mibi11g1783 191 Pfam Ring finger domain 140 180 IPR001841 -
Mibi11g1783 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 187 IPR013083 -
Mibi11g1783 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 35 187 - -
Mibi11g1783 191 FunFam Putative E3 ubiquitin-protein ligase RHB1A 116 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1783 Mibi-ChrMibi11 39243338 39245765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1783 1 191 C3H Transcription Factor Family AT4G00335 58.115 2.05e-75 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1783 11 39243338 39245765 Mibi11g1783 11 39243338 39245765 ECH