Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1781 ATGAAAAGTCCAACCTTCCATTCCCATTCCCGTCGCCGGAGCTCCGGCTCCGGCCACCGCACGCCCGACCACGATTCCTCCGCCGTTGACAAGTCAACCTCCTCTCGTAACCCAGTCGCCGCCGCCGCCAGATCAGTCGCCGCCGTTTTCGTCTCTTGCTTCACCCCGCCGGACGACACTAACTCCAAGAGCTTCGTCGATTCTCGCGATTTCAAAGCTTCTTCTTCTTCCTCCGTTGTGTCTAATTCTTCGGGAGCTGGTAGTCAGAGAGGGCAAGGGTCAAATAGGAGATTCAGTTCCAATTCATACAAGGCAGATCAGGTGAAAGATTCTAGGTCTCTGAATTTCACCATGGAGGATGTATTCCGAGCCACAAGAAACTTCTCCCCTGCTTATAAGGTGGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCTACTCTCCAGGGTGGAACTGTTGTTGCGGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAGCATTTGGGTGGTGAGTTCCAGAGTGAGATCCTAACGTTATCAACGGTTGAACATTTGAATTTGGTCAGGTTTTATGGATATTTGGAGCAAGGGGATGAAAGAATCCTTGTTGTGGAGTATGTACCAAATGGAACCCTTAGAGAGCATTTAGATTGCATGCGGGGGAACATGTTGGACCTTGCTTCTCGTCTAGACATTGCCATTGATGTGGCTCATGCCATCACCTATCTCCATATGTATATAGATCACCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTATTACTGAAAATTTGAGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACACTGATTCCGGTGCAACCCATGTGTCCACCCAAGTTAGAGGAACTGCCGGCTACTTGGATCCTGAATATCTCAGAACCTATCAACTCACTGAGAAGAGTGATGTCTATTCATTTGGCGTTTTACTTGTTGAACTTGTCACTGGTAGACGTCCCATTGAACCCAAATTGGAACTGAAGGAGCGAATAACCGCAAAATGGGCTATAAAGAAATTCATTGAGGGCGATGCCATCTCGGTGCTGGACCCTAAACTAGATCACAGTGCTGCAAATAATCTGGCACTAGAAAAGATACTTGAACTAGCCTTGCAGTGTTTGGCACCTCGTAGACAAAGCAGGCCTAGTATGAAGAGATGTGCTGAGATCCTCTGGACCATCCGTAAGGATTACAGAGAGCTATCAGCTCCAGATTTTCATTCATTATCCTCTTCTTCCCAGAGGAGCGCATCAATAAGAGAGTGA 1302 0.47 MKSPTFHSHSRRRSSGSGHRTPDHDSSAVDKSTSSRNPVAAAARSVAAVFVSCFTPPDDTNSKSFVDSRDFKASSSSSVVSNSSGAGSQRGQGSNRRFSSNSYKADQVKDSRSLNFTMEDVFRATRNFSPAYKVGQGGFGTVYKATLQGGTVVAVKRAKKSLYEKHLGGEFQSEILTLSTVEHLNLVRFYGYLEQGDERILVVEYVPNGTLREHLDCMRGNMLDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILITENLRAKVADFGFARQAPDTDSGATHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKLELKERITAKWAIKKFIEGDAISVLDPKLDHSAANNLALEKILELALQCLAPRRQSRPSMKRCAEILWTIRKDYRELSAPDFHSLSSSSQRSASIRE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1781 433 MobiDBLite consensus disorder prediction 1 15 - -
Mibi11g1781 433 CDD STKc_IRAK 134 403 - -
Mibi11g1781 433 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 88 205 - -
Mibi11g1781 433 MobiDBLite consensus disorder prediction 1 38 - -
Mibi11g1781 433 ProSiteProfiles Protein kinase domain profile. 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1781 433 Gene3D Transferase(Phosphotransferase) domain 1 206 423 - -
Mibi11g1781 433 PANTHER OS01G0750732 PROTEIN 28 425 - -
Mibi11g1781 433 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Mibi11g1781 433 ProSitePatterns Protein kinases ATP-binding region signature. 134 160 IPR017441 GO:0005524
Mibi11g1781 433 SUPERFAMILY Protein kinase-like (PK-like) 110 406 IPR011009 -
Mibi11g1781 433 SMART serkin_6 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1781 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mibi11g1781 433 MobiDBLite consensus disorder prediction 16 30 - -
Mibi11g1781 433 Gene3D Phosphorylase Kinase; domain 1 88 205 - -
Mibi11g1781 433 Pfam Protein kinase domain 132 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1781 433 MobiDBLite consensus disorder prediction 75 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1781 Mibi-ChrMibi11 39230955 39233327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1781 101 396 Receptor kinase-like Gene Family AT1G79620 44.816 1.05e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mibi11g1781 Pkinase 1.8e-50 CL0016