Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1758 ATGTTAGCATATGACGCCGCTTTTCTCGACAAAGAACTCTCTAAACACACCTCAATCTTTGGCCTCCCTCTTTGGGTTGTCGTCGGAATCATCGTCGGCGCCGTCATCGTCGTTTCCCTCTTCCTACTTTCTCTCTGCCTAACCTCACGCCGCCACAGACGCCGCCACAATACAAACAAGATTTTCGATCCTATAAATAGTGGGACCCCTGTTGTGTCTAAGGAAATCCAGGAGATTGTCCATTTACCTGGGCCCCACCAGCATAATCCTGCGCCGGTGCCGGAGATCCACCATGCTGACATGGGAAAATCAGAGCACAGGGTTTTTGTGTTTTCCGATGTTTCTAGTGGAGAAAGCAGGGGTTTGAGTGTTTCTGAGGCAAGGTCATCTTTTGGTGGTGGTGGGAGTATTGGGCCTGAGGTTTCGCATCTGGGTTGGGGAAGATGGTATACTCTGAGAGAGCTTGAAGATGCTACTAATGGATTGTGTGAAGAAAACGTGGTTGGTGAAGGTGGCTATGGAATAGTGTATAAAGGAGTACTTAGTGATGGTACTCGAGTTGCAGTAAAAAATCTTCTCAATAACAAGGGCCAAGCTGAGAAAGAATTCAAAGTGGAGGTAGAAGCCATTGGTCGTGTGCGGCACAAGAATCTTGTTCGGCTGCTCGGATACTGTGTTGAGGGAGCATACAGGATGCTTGTGTATGAGTATATTAACAATGGCAATCTAGAACAATGGCTTCATGGGGATGTTGGAGCTGTAAGCCCTCTGACATGGGATATCCGCATGAACATCTTACTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTTCACCGTGATATAAAGTCTAGCAACATACTCCTAGATCGACAATGGAACCCAAAAGTTTCAGACTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGAATAGTTATGTGACAACTCGAGTCATGGGCACTTTTGGTTATGTTGCACCAGAGTATGCCTGCACTGGAATGCTGACCGAGAAGAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATCATTACTGGGAGAAGTCCTGTTGATTATGGCAGACCCCAAGGAGAGGTTAATTTAATAGATTGGTTAAAAACCATGGTTGGAAATCGAAAAGCCGAGCAAGTAGTCGATCCCAAGCTCCCTGAGATGCCATCTTCAAAGGCTCTAAAGCGCGCACTTCTGGTTGCTCTTAGATGTGTTGATCCTGATGCAACTAAGAGGCCTAAAATGGGGCATGTCATCCACATGCTTGAGGCGGACGACCTACTATGCCCTGATCCTCAGGAACGCCGGGCAAGGGGAGAATCTTCGAATTCCAATCGTGACCATCAAGAGAAGAAGGAATTGAATTCAGATAAAAGAAGTAACGGAGAAGGGATCACTGATCAAAGTGAAACAGATGATAGCAGTAGAAGTCATCTTCAGCCAACTAGATGGAGATAA 1491 0.4614 MLAYDAAFLDKELSKHTSIFGLPLWVVVGIIVGAVIVVSLFLLSLCLTSRRHRRRHNTNKIFDPINSGTPVVSKEIQEIVHLPGPHQHNPAPVPEIHHADMGKSEHRVFVFSDVSSGESRGLSVSEARSSFGGGGSIGPEVSHLGWGRWYTLRELEDATNGLCEENVVGEGGYGIVYKGVLSDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYINNGNLEQWLHGDVGAVSPLTWDIRMNILLGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNPKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKTMVGNRKAEQVVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLCPDPQERRARGESSNSNRDHQEKKELNSDKRSNGEGITDQSETDDSSRSHLQPTRWR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1758 496 FunFam Probable serine/threonine-protein kinase At1g01540 142 237 - -
Mibi11g1758 496 Pfam Protein kinase domain 165 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1758 496 SUPERFAMILY Protein kinase-like (PK-like) 141 434 IPR011009 -
Mibi11g1758 496 MobiDBLite consensus disorder prediction 440 496 - -
Mibi11g1758 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Mibi11g1758 496 FunFam Putative receptor-like serine/threonine-protein kinase 238 449 - -
Mibi11g1758 496 SMART serkin_6 162 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1758 496 CDD STKc_IRAK 168 434 - -
Mibi11g1758 496 ProSiteProfiles Protein kinase domain profile. 162 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1758 496 PANTHER OS01G0323000 PROTEIN 7 464 - -
Mibi11g1758 496 ProSitePatterns Protein kinases ATP-binding region signature. 168 190 IPR017441 GO:0005524
Mibi11g1758 496 Gene3D Phosphorylase Kinase; domain 1 145 237 - -
Mibi11g1758 496 Gene3D Transferase(Phosphotransferase) domain 1 238 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1758 Mibi-ChrMibi11 38810108 38813192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1758 134 434 Receptor kinase-like Gene Family AT4G02010 45.574 2.40e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi11g1758 Pkinase 6e-47 CL0016