Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1746 ATGGAGGACGATTGGGATCTTCACGCCGTCGTCAGAGGCTGCGCCACCGTCTCCTCCTCCTCCTCCACCACCACCACCGCCTCCTCTGCTTCTTCCTCTGTTTTTGGCCTTCCCCTTTTTGTTGGTACTGAAAAAGCCTTATCTTCCCTCTCAGATTTAGACCCTCTTGAACCCACCTTACCTTCTTCTTCCTCCATTGAAGAATTGCATGATCTCTGTAAGCCTTTCTTCCCCAAATCACCCAAACCTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCATCTTCTTCCTCTCTGGTTTCTCCTCTGTCTCCTTCTTCCTCCTCCTTCTCCTACAATTCCCCCTCTGCCCCAACTAAACCCAAGAATCTTCAGCCTAAGAATCTTAAGCTGTCTCATCCTTCTCCTTCCTCCTCCACCCCAAGATCTAAAAGAAGAAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCTGCTGAATCTCTCTCCTCTGATATTTGGGCATGGAGGAAATATGGCCAGAAACCCATCAAGGGTTCTCCATATCCAAGAGGATATTACCGATGTAGCAGCTCCAAAGGTTGTCTAGCTAGAAAACAAGTTGAAAGAAACAGATCGGACCCTTCCATGTTCATAGTCACCTACACGGCGGAGCACAACCACCCCGCTCCGACTCATCGGAATTCCCTCGCCGGCTCAACTCGCCAGAAGCCATCAACCACCGCCGGCGCCGGCGAAACAGAGAAAATACCGGCCAAGACCAGTTCTCCGGCGAACTCTGGTGTGGAAGAAGAAGGGATAGTCGTAACCCATGGCACAGATTTCGAGAGCAAGGTTGAAATGGAAGATTTGATGGAGGAAGATGATGAACTGGGGTTGTCAGATTCGGTTCTAACTGATGATTTTTTTGATGGGTTGGATGAACTTACAGGGCCGCCGGCGCCGCCGTCTGCGGCGTCTCCGGTCACCGGAGACTGCTTCGCCGATCCGTTCTCCGCTGGTTTCGCTCTACCGGCTTGGCCGACATCGAACGCCGCCGCGACCACCGCCGGGGGAAATTGTTGA 1068 0.5234 MEDDWDLHAVVRGCATVSSSSSTTTTASSASSSVFGLPLFVGTEKALSSLSDLDPLEPTLPSSSSIEELHDLCKPFFPKSPKPLPPPPPPPPPPPSSSSSLVSPLSPSSSSFSYNSPSAPTKPKNLQPKNLKLSHPSPSSSTPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPSMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTTAGAGETEKIPAKTSSPANSGVEEEGIVVTHGTDFESKVEMEDLMEEDDELGLSDSVLTDDFFDGLDELTGPPAPPSAASPVTGDCFADPFSAGFALPAWPTSNAAATTAGGNC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1746 355 MobiDBLite consensus disorder prediction 219 266 - -
Mibi11g1746 355 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g1746 355 MobiDBLite consensus disorder prediction 222 244 - -
Mibi11g1746 355 MobiDBLite consensus disorder prediction 73 158 - -
Mibi11g1746 355 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g1746 355 MobiDBLite consensus disorder prediction 101 145 - -
Mibi11g1746 355 PRINTS Paxillin signature 235 256 - -
Mibi11g1746 355 PRINTS Paxillin signature 82 105 - -
Mibi11g1746 355 MobiDBLite consensus disorder prediction 78 100 - -
Mibi11g1746 355 FunFam WRKY transcription factor 22 148 218 - -
Mibi11g1746 355 Gene3D WRKY domain 148 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g1746 355 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g1746 355 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 311 IPR044810 GO:0003700
Mibi11g1746 355 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1746 Mibi-ChrMibi11 38504908 38506165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1746 1 353 WRKY Transcription Factor Family AT4G01250 48.485 2.11e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi11g1746 WRKY 2.5e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1746 11 38504908 38506165 Mibi11g1746 11 38504908 38506165 ECH