Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1734 ATGACTCCGCCGGAACCCTCCATCCTCGCCGCCGATTATGACATTGATTACGATGCGGCCGCCACGTTCTTCACCGACCTCAGCCTCGGTTCCTTGTTCACCAAGGCACTCCTCCTCCTCCTCTTCGTCTTCCTCCTCATCCGCCTCTCCCTCACCATCCTCCGCCGCCGCCGCGCCGGCGAGGGCGATAATTTCCCTACCACGACTCCTGACAATGATGATACCGACAACGACGAGGAGGAGAACCCGGTCCTAGATGAGGCAGACATTGAAGCAGCCATTAAATTGTACCCAAGTTTTATGTACAACAATAATGATAAGAAAGCTGATGGCGACGACAACGGAGATCAGAACAACACGGAATGTCCGATATGCATGTGTGAGTATAGGGAGTTTGAGATGATGAGGAGGATGCCACAGTGTGGGCATTACTTTCACCTTAATTGCCTCGACCATTGGCTTAGGATTAAATGGTCTTGTCCTGTGTGTCGTGACTCGCCCTCAATGCCACCTGTCACGCCGGCCCCGTCGTCATAG 537 0.5345 MTPPEPSILAADYDIDYDAAATFFTDLSLGSLFTKALLLLLFVFLLIRLSLTILRRRRAGEGDNFPTTTPDNDDTDNDEEENPVLDEADIEAAIKLYPSFMYNNNDKKADGDDNGDQNNTECPICMCEYREFEMMRRMPQCGHYFHLNCLDHWLRIKWSCPVCRDSPSMPPVTPAPSS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1734 178 SMART ring_2 122 163 IPR001841 -
Mibi11g1734 178 Pfam Ring finger domain 121 164 IPR001841 -
Mibi11g1734 178 PANTHER RING-H2 FINGER PROTEIN ATL67 70 176 IPR044289 GO:0016567|GO:0016740
Mibi11g1734 178 MobiDBLite consensus disorder prediction 61 82 - -
Mibi11g1734 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 168 IPR013083 -
Mibi11g1734 178 SUPERFAMILY RING/U-box 121 170 - -
Mibi11g1734 178 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1734 Mibi-ChrMibi11 38401815 38402351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1734 19 168 C3H Transcription Factor Family AT1G04360 31.646 5.17e-18 78.6