Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1733 ATGCAACAGCTGAGAGTCCCACCCACCTCCTTCTTCAGTAACATCCCCTCCCCTCTCAAATGGATCTCCCCCTCCTTCCTCCACCTCCCCATGTCCTCCTCCTCCTCGTTCATATCGAACATCGGCCTCGGCTACTCCATCGCCATCGCCCTGGCCTTCCTCTTCCTCCTCTCCACCCTCCTCCTCTCCTCCTACCTCTGCTGCCGCCCTAACCCTCCCCCTCCTCCTCCCCCTCCCCTCCCCCCCGACGGCATCCTCCTCCCCCGCATCATCTTCGTGGCCGACAACGAAGACGACGACGATAGCTCATCCATCTCCCTTGGCCTCCCCCCTCACATCATCAACTCCTACCCCACCTTCTCCTTCACCACCAAGGACTCCTCCAATGATGCCACGTGCTCCATATGTTTGTGTGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCCGAGTGCCGCCATTTTTTCCACCTTGTCTGCCTCGATGCATGGCTCAAGCTCAATGGCTCTTGTCCCGTTTGTCGCAACTCTCCCCTTCCCACGCCCATCTCCACTCCCATATCCACGCCCTTGCAGGAGGTCGTGCCTCTCTCTCATTATGCCGCTGATCGGAGGCGCACCAGTTGA 627 0.5901 MQQLRVPPTSFFSNIPSPLKWISPSFLHLPMSSSSSFISNIGLGYSIAIALAFLFLLSTLLLSSYLCCRPNPPPPPPPPLPPDGILLPRIIFVADNEDDDDSSSISLGLPPHIINSYPTFSFTTKDSSNDATCSICLCEYKDSEMLRMMPECRHFFHLVCLDAWLKLNGSCPVCRNSPLPTPISTPISTPLQEVVPLSHYAADRRRTS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1733 208 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Mibi11g1733 208 SMART ring_2 133 174 IPR001841 -
Mibi11g1733 208 PANTHER RING-H2 FINGER PROTEIN ATL67 33 206 IPR044289 GO:0016567|GO:0016740
Mibi11g1733 208 SUPERFAMILY RING/U-box 112 180 - -
Mibi11g1733 208 Pfam Ring finger domain 132 175 IPR001841 -
Mibi11g1733 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 179 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1733 Mibi-ChrMibi11 38390636 38391262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1733 42 199 C3H Transcription Factor Family AT5G06490 35.057 1.59e-29 107