Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1713 ATGACTGTCATTGAGGACACCGAAGGTTCAAGTGATGGAAGTGATGGCAACACTTCTGGGGCTAATCAAACAAGAAGGAAAAGAAGTCGAGAGGGAACACCAACCACTGGTGGAAATGGGAAAGCTGAGATACAGGCCAATAAGAAGATGGCAGTTGTCCCTGCCAGAGTCGCAGGACAACTAGCTGGACCTGTAGTTTCTTCAGTGATCCCTCCTGAAGCTTGGTTACAGAATGAACGTGAGATTAAGCGGGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCTAGGTTGAGAAAGCAGGCTGAGACTGAAGAGCTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGACTGATAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGACAGGCAGAAGAAATAGTTTTGAACGGTGTTGATGGCAAGAGGGCTACACCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGAAAATGATTATTGTGATGAGAAACAGAACTCCAGTGCCAAGCTGCATCAACTACTTGACACAAGTCCAAGAGCCGATGCCGTGGCGGCTGGCTAA 675 0.4415 MTVIEDTEGSSDGSDGNTSGANQTRRKRSREGTPTTGGNGKAEIQANKKMAVVPARVAGQLAGPVVSSVIPPEAWLQNEREIKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENVTLKSEINRLTDNSEKLRAENAALMEKLKNVQQGQAEEIVLNGVDGKRATPISTENLLSRVNNSSSNDRTTEEENDYCDEKQNSSAKLHQLLDTSPRADAVAAG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1713 224 Coils Coil 99 154 - -
Mibi11g1713 224 MobiDBLite consensus disorder prediction 1 23 - -
Mibi11g1713 224 Gene3D - 82 135 - -
Mibi11g1713 224 SUPERFAMILY Leucine zipper domain 82 138 IPR046347 GO:0003700|GO:0006355
Mibi11g1713 224 MobiDBLite consensus disorder prediction 172 186 - -
Mibi11g1713 224 Pfam bZIP transcription factor 79 141 IPR004827 GO:0003700|GO:0006355
Mibi11g1713 224 MobiDBLite consensus disorder prediction 165 224 - -
Mibi11g1713 224 MobiDBLite consensus disorder prediction 187 203 - -
Mibi11g1713 224 MobiDBLite consensus disorder prediction 1 47 - -
Mibi11g1713 224 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Mibi11g1713 224 MobiDBLite consensus disorder prediction 81 109 - -
Mibi11g1713 224 CDD bZIP_plant_GBF1 84 131 IPR045314 GO:0003700|GO:0006355
Mibi11g1713 224 PANTHER G-BOX-BINDING FACTOR 3-RELATED 6 202 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mibi11g1713 224 FunFam G-box binding factor 3 82 137 - -
Mibi11g1713 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Mibi11g1713 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1713 Mibi-ChrMibi11 38186782 38188470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1713 6 224 bZIP Transcription Factor Family AT2G46270 50.450 2.93e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi11g1713 bZIP_1 2.7e-21 CL0018