Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1710 ATGAAAGAAACCAAGATAATCACAAACAAGTTCATGAAACCAGAGTTTCTCACCGAAAGAGCTCCTAGGATTGTACGGATCAGCTTCTCCGATCACTACGCCACTGACACATCAAGCGACGAAGAAGAAGAAGAACAACAACAACAACAACACGAACACTTCCACCCCAGAACAAAGAAAATCATCCACGAAATCAGAATGGACAAAAGTTCCAATTTTTCTGCAAACAGAGAGGCTATGAATACAAATACCTCTGTTTCAAAACAGAGCCATGGCAGAAACAACAACAACATCTCCGGTAAGATCCGACCCGGAAAACACGACCCGGTTGACCAAAAGGAGAGAAGGTACCGTGGTGTAAGGCGCCGGCCATGGGGGCGGTGGTCGGCGGAGATAAGAGATCCGGCACGTGGTCAAAGGTTGTGGCTTGGAACCTTCAACACGGCGGAGGAAGCCGCCGTGTCATACGACAGAGCCGCCATTCGTATCAAAGGTCCTAATGCCACAACAAATATTCTACAGCCACCATCTAAAGTTGAAGACTTTATTGATGAATCTGAATCAGTGGACAAGATTTTCGAGTTGTTTAAGGAGCCACATGTGTCTTCACCAACATCTGTTTTGAGGTTTGAGGAACCCAAGACAGAACTCATAGAAGGAGGAGGAGGAGAAGAACAAGAAGAAGAAGTGAAGGTAGAGGTAGAAGCAGGGCCATGTTTTCAGGATTGTGATTTATTGTTACCATCAGGTTCTCCATTTTCTTCCATACTTTCAGAATGTGAAGTCCCTCTACCAATGTTCTTTGATCAGTTTGCTTCTGGTGATGGTTTTAATGTCTCTAGTCCTTTCCATATGGAACAAGATTTTGAATCGTGTAAATGGGACATAGATAGCTACTTTCAAGAACAAGACAGTGCAGAAAACTATTTCATGATTGAAGGGTGA 945 0.4392 MKETKIITNKFMKPEFLTERAPRIVRISFSDHYATDTSSDEEEEEQQQQQHEHFHPRTKKIIHEIRMDKSSNFSANREAMNTNTSVSKQSHGRNNNNISGKIRPGKHDPVDQKERRYRGVRRRPWGRWSAEIRDPARGQRLWLGTFNTAEEAAVSYDRAAIRIKGPNATTNILQPPSKVEDFIDESESVDKIFELFKEPHVSSPTSVLRFEEPKTELIEGGGGEEQEEEVKVEVEAGPCFQDCDLLLPSGSPFSSILSECEVPLPMFFDQFASGDGFNVSSPFHMEQDFESCKWDIDSYFQEQDSAENYFMIEG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1710 314 Gene3D AP2/ERF domain 115 173 IPR036955 GO:0003700|GO:0006355
Mibi11g1710 314 CDD AP2 124 171 IPR001471 GO:0003700|GO:0006355
Mibi11g1710 314 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Mibi11g1710 314 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Mibi11g1710 314 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Mibi11g1710 314 MobiDBLite consensus disorder prediction 104 118 - -
Mibi11g1710 314 MobiDBLite consensus disorder prediction 33 56 - -
Mibi11g1710 314 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 224 - -
Mibi11g1710 314 MobiDBLite consensus disorder prediction 82 118 - -
Mibi11g1710 314 MobiDBLite consensus disorder prediction 82 101 - -
Mibi11g1710 314 SUPERFAMILY DNA-binding domain 116 172 IPR016177 GO:0003677
Mibi11g1710 314 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Mibi11g1710 314 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Mibi11g1710 314 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1710 Mibi-ChrMibi11 38160222 38161166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1710 3 219 AP2-EREBP Transcription Factor Family AT4G27950 38.843 3.55e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi11g1710 AP2 5.3e-13 CL0081