Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1681 ATGGATAATTATGGGTCTTCTTCACCACACCGTTATCCAAGCCCTTATGGATACAATAGTAATCCTCCTACTGCTCCTCCTTATCCACCTCTAGCTTCAGATCCAATGGCACCGCCTCCTTACCCTCATGCATTCAATCATCCACATTCCTTCAATTATTCCTACCCCCCACCTCCTCCACCATTTGATCATACCCATTACCCTCCACCACCACCACCAGCAGAGTATAGCCACCCCCCTCCGCCACCGGATTATAGCCATACTAGTCCACCATCTGACTTTAATTATCCCCCTCCACCACCATACTCTGCTCCTCCTCACCCTTATCCTTATCCTTACGCCACTCCTTCAGGGGTTCATAACACCCCTCTGCCTGTTGCCCACCCTCATAGTTTTCAGTATGGATCATCTCATTATCCCCCCCAACGACCCGAGGCAGGCCCATATTCACGTGCGAATAGTTTCTCTGGTTCCCCCCAGCATGATAGAATGAGCTCTGCTGGGGATGTGTCATTACAAACTAGTCATAGTTTCAGTCCCTCTCGGACTTCTGCATACCCACCGTTGGATGATCTTATGGACAAAGTTAGCTTGTCAGATAATCAACCAACCGCTCCTGCATCACCCCATGCACCCGTAGGGCAGCAATTAGAACATTCCGTTTCAGTTTCACACCAAGATAGGAGAGAGGAATTGTACAATTATTCTAATAACTCCTCTGGATGGGGATCTCCCCACTCTGGTCAGATCGATTCATCTAATCTTTCTTATTCGGGCTCATTTAATGATTCAGTCCATAGTCAGAGTTTGCAGATTGTTCCATCACAGAATAAAGGATCGTTGAAAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTAGGGGATATGTTTGGTAAATTACCAGGAAATATGGGCAACAAAATTGAGGGAACCATGAGTAAGAAGATTACTAGTGATCCTTATGTAACAATTTCAGTATCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGTGAGAATCCTGTTTGGACTCAACATTTCCATGTTCCTGTTGCACATAATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTATTAGGTTCACAGCTCATTGGCATTGTATCAATTCCTGTAGAACAAATATACTCCGGGGGAATAATAGAAGGGACCTATCCTGTGCTGAATAATAATGGGAAGCCTTGTAAGCCAGGTGCTGTCTTGAGAATATCCATTAAGTACATCCCAATTGAGAGACTGAGCATTTATCACCATGGAGTTGGAGCAGGACCAGAATACGCTGGAGTTCCTGGCACTTATTTTCCTTTAAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTAATGTGATACTGGACCAAGGGATGTATTATGCGCATGGAAAATGTTGGCACGACATCTTTGATGCCATTCGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTTTGGGACAAAGTTCAGTTGATAAGGGATGTCGGTAATCCATCAGGTTCCACGCTGGGTGAACTTCTAAGGTCCAAGTCACAGGAAGGAGTCAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGGAACATTTTAGGTTACAAAACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAACACTCTTCCGTTCAAGTGCTGCTTTGTCCACGCATTGCAGGAAAACGACATAGCTGGGTGAAGCAAAGGGAAACCAGTACTATATACACACACCACCAGAAAACTGTAATTGTCGATGCTGATGCTGGAGGTAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCAACCATCCTCTTTTTAGGACACTCCAGACACTGCACAAGGATGACTATCATAACCCTACTTTCACGGGTAATTTTGGTGGCTGTCCACGGGAGCCATGGCATGACTTGCATTCTAGAATTGATGGTCCAGCAGCATATGATGTTCTGACCAACTTTGAGGACCGCTGGTTAAAAGCTTCAAAACCTCATGGGATAAAAAAGTTGAGAAGTTCATATGATGATTCATTGCTTAAGCTGGAAAGAATTCCAGACATTATTGGCATGTCTGATGCTCTTATTGCTAATGATAATAATAACCCTGAAGCTTGGCATGTTCAGATATTTCGATCAATTGATTCAAATTCTGTAAAGGGTTTTCCAAAGGATCCAAGAGATGCGACAAGCAAGAACTTAGTTTGCGGGAAGAATGTGTTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCACTACATATATATAGAGAATCAATATTTCATTGGGTCTTCATTCAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTAAAGATTGCTGAAAAGATCAGGGCCAACGAGCGGTTTGCTGTGTATATTGTTATTCCAATGTGGCCTGAGGGTGTTCCCACGGGGGCTGCCACACAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGAGGCATTCTCACCAGAAGACTACCTGAACTTTTTCTGTCTTGGCAATCGGGAGGTCAATGATTCATATGGTAATAATGTAACGCCTGGAAATCCTCCTCCAGCAAATAGTCCACAGGCACTAAGTCTAAGTAGCCGACGTTTTATGATTTACGTTCATTCAAAAGGTATGATAGTTGATGATGAGTATGTGATATTGGGATCTGCAAACGTCAACCAGCGGTCTATGGAAGGAACAAGGGATAGTGAAATTGCAATGGGAGCTTACCAACCTCATTATACCTGGGCAAGAAGGCATTCCTATCCACGTGGACAGATCCATGGATATAGGATGTCTCTCTGGGCAGAACACACAGCAACAATTGAAAACTGCTTTTTGCAACCGGAGAGCCTTGAATGTGTAAGAAGAGTAAAAGCAATGGGTGAAATGAACTGGAAACTGTTTGCAGCACCTGAAGTAACAGAGATGAAAGGGCACCTACTGAAATACCCAGTAGAAGTTGATCGAAAGGGGAAGGTTAAATCCCTCCCTGGCCATGAAAATTTCCCTGATGTTGGAGGCAAAATAACAGGGTCATTTCTTGCCATTCAGGAGAATCTTACCATTTAA 3312 0.4309 MDNYGSSSPHRYPSPYGYNSNPPTAPPYPPLASDPMAPPPYPHAFNHPHSFNYSYPPPPPPFDHTHYPPPPPPAEYSHPPPPPDYSHTSPPSDFNYPPPPPYSAPPHPYPYPYATPSGVHNTPLPVAHPHSFQYGSSHYPPQRPEAGPYSRANSFSGSPQHDRMSSAGDVSLQTSHSFSPSRTSAYPPLDDLMDKVSLSDNQPTAPASPHAPVGQQLEHSVSVSHQDRREELYNYSNNSSGWGSPHSGQIDSSNLSYSGSFNDSVHSQSLQIVPSQNKGSLKVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGNMGNKIEGTMSKKITSDPYVTISVSNAVIARTFVISNSENPVWTQHFHVPVAHNAAEVHFVVKDSDVLGSQLIGIVSIPVEQIYSGGIIEGTYPVLNNNGKPCKPGAVLRISIKYIPIERLSIYHHGVGAGPEYAGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVILDQGMYYAHGKCWHDIFDAIRQARRLIYITGWSVWDKVQLIRDVGNPSGSTLGELLRSKSQEGVRVLLLIWDDPTSRNILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWVKQRETSTIYTHHQKTVIVDADAGGNRRKIIAFVGGLDLCDGRYDTPNHPLFRTLQTLHKDDYHNPTFTGNFGGCPREPWHDLHSRIDGPAAYDVLTNFEDRWLKASKPHGIKKLRSSYDDSLLKLERIPDIIGMSDALIANDNNNPEAWHVQIFRSIDSNSVKGFPKDPRDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVNDSYGNNVTPGNPPPANSPQALSLSSRRFMIYVHSKGMIVDDEYVILGSANVNQRSMEGTRDSEIAMGAYQPHYTWARRHSYPRGQIHGYRMSLWAEHTATIENCFLQPESLECVRRVKAMGEMNWKLFAAPEVTEMKGHLLKYPVEVDRKGKVKSLPGHENFPDVGGKITGSFLAIQENLTI 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1681 1103 CDD C2_plant_PLD 282 435 - -
Mibi11g1681 1103 Pfam Phospholipase D Active site motif 950 976 IPR001736 GO:0003824
Mibi11g1681 1103 Pfam Phospholipase D Active site motif 614 648 IPR001736 GO:0003824
Mibi11g1681 1103 SMART pld_4 949 976 IPR001736 GO:0003824
Mibi11g1681 1103 SMART pld_4 613 648 IPR001736 GO:0003824
Mibi11g1681 1103 SMART C2_3c 289 411 IPR000008 -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 55 255 - -
Mibi11g1681 1103 FunFam Phospholipase D delta 283 430 - -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 149 184 - -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 1 43 - -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 19 43 - -
Mibi11g1681 1103 PANTHER PHOSPHOLIPASE D 278 1094 IPR015679 -
Mibi11g1681 1103 Gene3D Endonuclease Chain A 762 1002 - -
Mibi11g1681 1103 Pfam Phospholipase D C terminal 1023 1093 IPR024632 -
Mibi11g1681 1103 Gene3D C2 domain 283 422 IPR035892 -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 197 221 - -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 1 18 - -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 233 255 - -
Mibi11g1681 1103 FunFam Phospholipase D 762 995 - -
Mibi11g1681 1103 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 437 IPR035892 -
Mibi11g1681 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 949 976 IPR001736 GO:0003824
Mibi11g1681 1103 ProSiteProfiles C2 domain profile. 266 412 IPR000008 -
Mibi11g1681 1103 MobiDBLite consensus disorder prediction 55 113 - -
Mibi11g1681 1103 Gene3D Endonuclease Chain A 489 728 - -
Mibi11g1681 1103 Pfam C2 domain 288 414 IPR000008 -
Mibi11g1681 1103 SUPERFAMILY Phospholipase D/nuclease 461 712 - -
Mibi11g1681 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 613 648 IPR001736 GO:0003824
Mibi11g1681 1103 SUPERFAMILY Phospholipase D/nuclease 772 1035 - -
Mibi11g1681 1103 FunFam Phospholipase D delta 489 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1681 Mibi-ChrMibi11 37698963 37713432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1681 82 1103 Phospholipase D Gene Family (Wang group) AT2G42010 70.009 0.0 1478