Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1672 ATGAATTTAAAGGGACAAAAATTTGTGAGGTTTGATGATTGGAGTTCAGAGTCATCATCTACCACTGAGCAGAAAAATTCTAACAATAATGGATATCAGGATAGAAAACTGAGACCAAGTGTAAGTGCTGTCTTAGATAGCATCAAAAGAAGACTTGAGAATGGGTCTGGTAAGATAAAAAACTTACGGAAATCCTCAACTGTTCATCCTATAACTGATAGACCGCCCAAGACATCGGCTCCCAGAAGAAAAATTCTTGATCCACAGGGGTCGTTCCTTCAGAAATGGAACAAAATATTTGTAGTCACATCTGTGATGGCTGTCTCAGTGGATCCATTGTTCTTTTACATCACAGAGATTGGAGACTCAGGGAATTGCCTCAGGTTGAATGGAAACTTGCAGATTATTGCCTCTGTTCTTCGCACATTCTTTGATCTTTTCTACATTCTTCACATAATCTTTCAGTTTCAAACTGGGTTCATTGCTCCTTCCTCTCGGGTATTTGGAAGGGGTGAGCTGGTTAATGATCGTTGGGCTATCATGAAAAGATACTTATCTACAGTCTTTATCATCGATGTTCTGGCAATTGTTCCACTTCCGCAGGTGATTGTTTTATTTATCATTCCAAAACTGGAGGGCTCAGTTCCATTTCTAGCGAAGGACTTGTTGACATACATGGTTTTGATTCAGTATGTGCCAAGAGTCTTGCGCATTTACCCTTTATTCAAAGAAGTAACAAGAACTTCTGGCATACTCACAGAAACAGCATGGGCTGGAGCTGCTTATAATCTTTTCCTGTATATGCTGGCAAGTCATTTGGTTGGAGCTATTTGGTACCTGCTTTCAGTAGAATCAGACGTTCGGTGCTGGCACAGAGCATTGAAAAATACATCATATAGTGATAATAAGTATCTGATCTGTGGTAAACAGATTGAAATTGTTACTTCAAAACTCAGTAATTCTTGTGCTGTTGTTGATCCTTCTCAAATTACCAACTCAACAACCTTCAATTTTGGAATATATGCCGATGCTCTACAATCTGGAGTGGTTAATTCAACAACAGATTTTCCTCAGAAGTTCTTCTACTGCTTCTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGACAGAACCTTAAGACAAGTACTTATGTCCCAGAGATAATCTTTGCTATCTTCATTGCCATCTTTGGATTAGTTCTGTTCTCATTCCTTATAGGAAACATGCAGAAATATCTGCAATCTACAACAGTTAGAGTTGAGGAGATGAGAATCAAAAGGAGAGATGCAGAGCAATGGATGGCCCATCGTATGCTCCCCGAGAACTTAAGGGAAAGGATCAGACGTTATGAACAATACAAATGGCAACAAAATCGGGGTGTTGAAGAAGAGGCATTAATTCACAACCTTCCTAAAGATCTCAGAAGGGACATAAAGCGTCATCTTTGCTTGGCCTTACTTAAAAAAGTGCCAATGTTTGAGAAAATGGATGAACAATTGTTGGATGCAATGAGTGATAGATTGAAGCCAATTCTTTATACAGAGAAGAGTTACATTGTTCGTGAAGGAGATCCAGTCGATGAAATGCTCTTCATTGTTCGAGGAAAGCTTGCTACTGTGACAACAAATGGAGGAAGAACTGGTTTCTTCAACTCCTCAGTTCTCCAAGCTGGTGACTTCTGTGGAGAAGAGCTTCTAACATGGGCCTTGGACCCCAATTCCTCTTCAAATCTTCCCATCTCAACAACAACAGTGGAATCGATATCAGAAGTTGAGGCTTTTGCTCTCCTCCCTGAGGACTTGAAGTTTGTCACTTCTCAATTCCGAAGACTTCATAGCAAACAGCTTCAGCACACTTTCAGGTTTTATTCCTTGCAGTGGAAGACATGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGACACTGCAGAAAGAAAGTAGAGAGGTCATTGCGTGAGGCAGAAGAAAGACTAAAAGATGCTTTGGCCAATGAGAATGCATCATCGTCAACACCAAGTCTTGGAGCCATCATTTATGCTTCAAGGTTTGCTGCCAACGCCTTACGAAACTTGCGACAAAACCGCGAACCTAACAACAGAATGTCACCCAGATTGCTGCCTCTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACTTCTCAAAGTCACTAG 2169 0.4108 MNLKGQKFVRFDDWSSESSSTTEQKNSNNNGYQDRKLRPSVSAVLDSIKRRLENGSGKIKNLRKSSTVHPITDRPPKTSAPRRKILDPQGSFLQKWNKIFVVTSVMAVSVDPLFFYITEIGDSGNCLRLNGNLQIIASVLRTFFDLFYILHIIFQFQTGFIAPSSRVFGRGELVNDRWAIMKRYLSTVFIIDVLAIVPLPQVIVLFIIPKLEGSVPFLAKDLLTYMVLIQYVPRVLRIYPLFKEVTRTSGILTETAWAGAAYNLFLYMLASHLVGAIWYLLSVESDVRCWHRALKNTSYSDNKYLICGKQIEIVTSKLSNSCAVVDPSQITNSTTFNFGIYADALQSGVVNSTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTYVPEIIFAIFIAIFGLVLFSFLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMAHRMLPENLRERIRRYEQYKWQQNRGVEEEALIHNLPKDLRRDIKRHLCLALLKKVPMFEKMDEQLLDAMSDRLKPILYTEKSYIVREGDPVDEMLFIVRGKLATVTTNGGRTGFFNSSVLQAGDFCGEELLTWALDPNSSSNLPISTTTVESISEVEAFALLPEDLKFVTSQFRRLHSKQLQHTFRFYSLQWKTWGACFIQAAWRRHCRKKVERSLREAEERLKDALANENASSSTPSLGAIIYASRFAANALRNLRQNREPNNRMSPRLLPLLPQKPSEPDFTSQSH 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1672 722 Pfam Ion transport protein 96 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi11g1672 722 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Mibi11g1672 722 CDD CAP_ED 491 622 IPR000595 -
Mibi11g1672 722 SMART cnmp_10 491 622 IPR000595 -
Mibi11g1672 722 Gene3D Jelly Rolls 489 609 IPR014710 -
Mibi11g1672 722 ProSiteProfiles cAMP/cGMP binding motif profile. 491 575 IPR000595 -
Mibi11g1672 722 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
Mibi11g1672 722 Pfam Cyclic nucleotide-binding domain 512 600 IPR000595 -
Mibi11g1672 722 MobiDBLite consensus disorder prediction 14 36 - -
Mibi11g1672 722 MobiDBLite consensus disorder prediction 692 722 - -
Mibi11g1672 722 SUPERFAMILY cAMP-binding domain-like 420 613 IPR018490 -
Mibi11g1672 722 Coils Coil 643 663 - -
Mibi11g1672 722 Gene3D - 99 415 - -
Mibi11g1672 722 MobiDBLite consensus disorder prediction 63 84 - -
Mibi11g1672 722 Gene3D Helix hairpin bin 418 482 - -
Mibi11g1672 722 SUPERFAMILY Voltage-gated potassium channels 87 413 - -
Mibi11g1672 722 Coils Coil 45 65 - -
Mibi11g1672 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 72 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1672 Mibi-ChrMibi11 37606120 37610505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1672 1 719 Ion Channels AT5G53130 64.869 0.0 944