Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1671 ATGTTTCATAATTTCTTTTTTCATTGTAAAAAGCAGAACCTTTGTGCAAATTTTGTTGGCCATAAAAAAAATAAGAGAGAGAGATCCTTTCTCTTTTCCTCTCTGCATTCTCTCAGAAATGGCGGAAAAGAAATCAGGGGAAAAGATAATTCTGTAGGGGTTCATATTCCCGCCATTTTTAAGTCTTTTGTAGAACTCGTGGCAGTGTTTCTCCAGATGAAGCTAAAATTTTCCATCCATTTGGGGAGGTTTGGTTATTGGAGTTCAGAGTCCTCATCTCCTACTGAGAAGAGAAATTCTAGTGATGATGGATATTATGGAAGAAAAATGAGACCAAGCGTAAGCTCAGTTTTAGATAGTATCAAAAGAAGACTTGAGGATGGGTCTGATAAGATAAACAACTTGAAAAACTCCTCAACTGTTCATCCTATAAGTAATAGACTGCCCAAGACATCGCCTCCCAGAAGAAAAATTTTTGATCCACAAGGGTCGTTCCTTCAGAAATGGAACAAAATATTTGTAATCACATCTGTGATGGCTGTCTCTGTGGATCCGTTGTTCTTTTACGTCCCAGCAATTGTAGATACAGACAAATGCCTTGAGTTGAATGGAAACTTGCAAATTATTGCTTCTGTTCTTCGCACATTGTTCGATCTTTTCTACATTCTTCACATAATCTTTCAGTTTCAAACTGGGTTTATTGCTCCTTCTTCTCGGGTATTCGGAAGGGGCGAGCTTGTTAATGATCATCGGGCTATCATGAAAAGATACTCATCTTCATACTTTATCATCGATGTTCTATCAATTGTTCCACTTCCACAGGTGGTTGTTTTATTTATCATTCCAAAACTGAGAGCCTCAGTTCCATTCGTGGCAAAGGACTTGTTGATATATATGATCATGATCCAGTATGTTCCAAGAGTCCTTCGCATTTACCCTTTATTCGAAGAAATAACAAGAATTTCTGGCATACTCACAGAGACAGCATGGGCTGGAGCTGCTTATAATCTTTTTCTGTATATGCTGGCAAGTCATTTGGTTGGAGCTTTCTGGTACGTGTTTTCGGTAGGGTCAGAGGTTCGGTGCTGGCGTGGAGCATTGAAAAATACGGAATATAATGACAATGAGTATCTGAGCTGTCGTACTCATAACCAGAATGAAATTGTTACTTCACTTCTTACTAATGCTTGTGCAGCCGTTGATCCTTCTCAAACTACCAACTCAACAACCTTCAATTTTGGAATATATACTGATGCGCTACAATCTGGTGTGGTTAGTTCAACAATAGATTTTCCTCAGAAGTTCTTCTTCTGCTTCTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGACAGAACCTTGCAACAAGTACTTATGTTGGGGAGATTATCTTTGCCATCTCCATTACCAGCTTTGGTTTGGTTCTGTTCTCTTTTCTGATTGGAAACATGCAGAGGTATCTGCAATCTACAACTATTAGAATTGAAGAGATGAGAGTTAAAAGGAGAGATGCAGAGAGATGGATGGCCCACCGTATGCTTCCTGAGAACATAAGGGAAAGAATCAGACGGTATGAACATTACAGGTGGCAAGAAAATCGAGGTGTTGATGAAGAAGCATTAATTCGCAACCTTCCTAGAGATCTCAGAAGGGACATAAAGCGTCGTCTGTGCTTGGATTTACTTAAAAAAGTTCCACTGTTTGAGAAAATGGATGAACAATTGTTGGATGCAATGAGTGAAAGACTGAAGCCTGTTCTTTATACAGAGAAGAGTTACATTGTTCGGGAGGGAGATCCGGTCGATGAAATGCTTTTCGTTATGCGAGGGAAGCTCGCTACGATGACAACAAATGGAGGAAGAACTGGTTTCTTCAACTCCTCAGTTCTCCAAGCTGGTGACTTCTGTGGAGAAGAGCTTCTAACATGGGCCTTGGATCCCAATTCCTCTTCCAATCTTCCCATTTCAACAAGAACAGTGGAATCCATTTCAGAAGTTGAAGCTTTTGCTCTCATGCCTGATGACTTGAAGTTTGTCACTACTCAATTCCGAAGACTTCATAGTAAACAGCTTCAGCACACTTTCAGGCAAGACTTGATAATGTTCCTCACATGGTTTTATTCCTTGCAATGGAGGACATGGGCTGTGTGTTTCATACAAGCAGCTTGGCGTCGATACTGCAGAAAGAAGGTAGAGAGGTCATTGCGTGAAGCAGAAGAAAAACTGAAAGATGTTTTAGCCAATGAGAATGGATCATCTTCATCATCAACATCACCAATTCTTGGTGCCTCCATTTATGCATCAAGGTTCGCTACCAACGTAAGAAACTTGCAACAAAACAGTGAACAATTGACACAGAGATTGCTGCCTCTGTTACCTCAAAAGCCATTTGAGCCAGATTTTACTTCTCAAACTCACTAG 2418 0.4024 MFHNFFFHCKKQNLCANFVGHKKNKRERSFLFSSLHSLRNGGKEIRGKDNSVGVHIPAIFKSFVELVAVFLQMKLKFSIHLGRFGYWSSESSSPTEKRNSSDDGYYGRKMRPSVSSVLDSIKRRLEDGSDKINNLKNSSTVHPISNRLPKTSPPRRKIFDPQGSFLQKWNKIFVITSVMAVSVDPLFFYVPAIVDTDKCLELNGNLQIIASVLRTLFDLFYILHIIFQFQTGFIAPSSRVFGRGELVNDHRAIMKRYSSSYFIIDVLSIVPLPQVVVLFIIPKLRASVPFVAKDLLIYMIMIQYVPRVLRIYPLFEEITRISGILTETAWAGAAYNLFLYMLASHLVGAFWYVFSVGSEVRCWRGALKNTEYNDNEYLSCRTHNQNEIVTSLLTNACAAVDPSQTTNSTTFNFGIYTDALQSGVVSSTIDFPQKFFFCFWWGLRNLSSLGQNLATSTYVGEIIFAISITSFGLVLFSFLIGNMQRYLQSTTIRIEEMRVKRRDAERWMAHRMLPENIRERIRRYEHYRWQENRGVDEEALIRNLPRDLRRDIKRRLCLDLLKKVPLFEKMDEQLLDAMSERLKPVLYTEKSYIVREGDPVDEMLFVMRGKLATMTTNGGRTGFFNSSVLQAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALMPDDLKFVTTQFRRLHSKQLQHTFRQDLIMFLTWFYSLQWRTWAVCFIQAAWRRYCRKKVERSLREAEEKLKDVLANENGSSSSSTSPILGASIYASRFATNVRNLQQNSEQLTQRLLPLLPQKPFEPDFTSQTH 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1671 805 Pfam Ion transport protein 169 491 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi11g1671 805 Pfam Cyclic nucleotide-binding domain 586 674 IPR000595 -
Mibi11g1671 805 Coils Coil 766 786 - -
Mibi11g1671 805 Coils Coil 727 747 - -
Mibi11g1671 805 Coils Coil 118 138 - -
Mibi11g1671 805 SUPERFAMILY cAMP-binding domain-like 496 688 IPR018490 -
Mibi11g1671 805 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 144 800 - -
Mibi11g1671 805 Gene3D - 172 490 - -
Mibi11g1671 805 MobiDBLite consensus disorder prediction 88 108 - -
Mibi11g1671 805 CDD CAP_ED 566 695 IPR000595 -
Mibi11g1671 805 FunFam Cyclic nucleotide-gated ion channel 1 493 557 - -
Mibi11g1671 805 Gene3D Jelly Rolls 564 684 IPR014710 -
Mibi11g1671 805 FunFam Cyclic nucleotide-gated ion channel 1 564 682 - -
Mibi11g1671 805 SUPERFAMILY Voltage-gated potassium channels 160 488 - -
Mibi11g1671 805 Gene3D Helix hairpin bin 494 557 - -
Mibi11g1671 805 ProSiteProfiles cAMP/cGMP binding motif profile. 566 650 IPR000595 -
Mibi11g1671 805 SMART cnmp_10 566 697 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1671 Mibi-ChrMibi11 37599233 37605997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1671 96 802 Ion Channels AT1G01340 60.615 0.0 885