Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1670 ATGTCACTCCCTCCACAACACATACTTCAACATTCTTTCTTCATTAAACCCTCCCAAATTGCTGCCCTCTGCCGCCAACTTCCGGTCCACCACTTTCGAGAACCTCGCCACGTTCCTATGGCGGTGCCGTACCATATCACTCCGATCACCGCCAGAGAGGCAGAAGTTCGCATGATACTTCCCGACCACATTAACTACGATTTCAATTCTCTGTTGTCAAATATCTTCAATATTATCATCTCCGATCATATTCTACCTCAAATTTCATCCATGGAAGACCATATCGCTACCAGTAACGTCTACAATCTCTTCGTCAAGCTTTTAGACGGAAAAACCCTAACCCTAAAATTCCCATCTCCGATTCTACACACCAATTCCCTAAAAGATCGCATCTTCGATGTCACCAGAATCCCCACACAGCACCAGCGACTCGTTACCGGCGTCCATGATCTCAACGGGGACAAATCCGTAATTTCCTGTAAAGGCGAAAATGAGTTCCCCACCGTCCATTTGCTTCTGCGACTCGCAGGTGGAAAGGGAGGGTTTGGATCGCTTTTGCGAGGTGCAGCCACAAAGGCAGGGCAGAAAAAGACGAACAATTTTGAAGCTTGTAGGGATATGAGTGGAAGAAGGTTGAGGCATGTGAATGCTGAGAAGAGGTTGGAGGAGTGGAAGGCGGAGGAGGAAGAGAGGAAGCTGGAGAAGATTGCGGAGGAGTTTTTGAAGAAGCAGGCGAAGAAGGGGAAGAAGGGTGTGGGTGATGGTGAGGCCCATAAGTATGTGGCTAAGTATAGGGAGGAGTCTGAGAGATGTGCTGCTGAGGTTGCTGAGTCTGTGAAGGAGGCTTTGATGTCTGTCAATGGTAAGAGGAAGGTTTTAGATTCTGTAAAATGTGGGGCAGATGCAAAGAAGATGAAGATTTGGATGGGAAAGAGAAAATTAAATGAAAGTGATAGTGATGATTCTGATGAGGATGGAAGCGAAGGTGAAGAAGAAATTGAGAAATCAACTGTATTAAACAATGGGAATGACTCAGACTCGAATAAGGCTGAAGGCAGTTCAGGTTCAGTAACTGGTGGGAAACAGGATGGTGAATCTTCTGTGGCAGGCTCAAGTGGAAGTTGCTCTGAAGAAGAGAAAGAGACTGTTCTAGAAGGAAAATCGGATTCCAGCAATGGTCTTGACATTGAATCTCTCCAGAACATAACAGGCAAATCGGTTGAACCTATATGTGATAAGATGGGAAACAGTATCATTATGCCTGTTTTGGAGTCCCCATCTTTGGAAATTGATGCTGAAGATAGAAAGGACTCCAGTGAAGCTGACCAGCTTGATTCAGCAGTTGCTCAAGCCACAAATCTTGTAACTGATGGACTGCATGAGCATAAAGCATCATCTCATGAAGAAACTCACACAAGTGCTAGTGCTGAGGAAATAATTGAGCCTTTGAATTTTGAGGCATTTAATTCAGCTGCAGAACTCGAGGTTCTTGGCCTCGAAAGGTTGAAGTCTGAACTGCAGGCACGCGGGTTAAAATGTGGAGGCACCTTGCAGGAGCGTGCTGCCAGGCTTTTCCTCCTGAAATCAACTCCACTGGATAAGCTTCCCAAAAAGCTGCTTGCGAAAAAATGA 1632 0.4571 MSLPPQHILQHSFFIKPSQIAALCRQLPVHHFREPRHVPMAVPYHITPITAREAEVRMILPDHINYDFNSLLSNIFNIIISDHILPQISSMEDHIATSNVYNLFVKLLDGKTLTLKFPSPILHTNSLKDRIFDVTRIPTQHQRLVTGVHDLNGDKSVISCKGENEFPTVHLLLRLAGGKGGFGSLLRGAATKAGQKKTNNFEACRDMSGRRLRHVNAEKRLEEWKAEEEERKLEKIAEEFLKKQAKKGKKGVGDGEAHKYVAKYREESERCAAEVAESVKEALMSVNGKRKVLDSVKCGADAKKMKIWMGKRKLNESDSDDSDEDGSEGEEEIEKSTVLNNGNDSDSNKAEGSSGSVTGGKQDGESSVAGSSGSCSEEEKETVLEGKSDSSNGLDIESLQNITGKSVEPICDKMGNSIIMPVLESPSLEIDAEDRKDSSEADQLDSAVAQATNLVTDGLHEHKASSHEETHTSASAEEIIEPLNFEAFNSAAELEVLGLERLKSELQARGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1670 543 Coils Coil 489 509 - -
Mibi11g1670 543 Gene3D - 97 178 - -
Mibi11g1670 543 MobiDBLite consensus disorder prediction 313 395 - -
Mibi11g1670 543 Pfam Silencing defective 2 N-terminal ubiquitin domain 101 249 IPR024974 -
Mibi11g1670 543 SUPERFAMILY Ubiquitin-like 94 179 IPR029071 -
Mibi11g1670 543 PANTHER SPLICING FACTOR SF3A-RELATED 102 542 - -
Mibi11g1670 543 Coils Coil 214 246 - -
Mibi11g1670 543 Pfam Replication stress response SDE2 C-terminal 467 542 - -
Mibi11g1670 543 MobiDBLite consensus disorder prediction 338 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1670 Mibi-ChrMibi11 37592509 37598057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1670 483 542 C2H2 Transcription Factor Family AT5G06160 50.000 1.62e-09 58.5