Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1669 ATGATAATCAAGCGGACTATGAAAACTGAAATGCCGAACCTGAAACGTTGTAAGCTAGAGGAGGAGCAGGATTCCGAGGAGAATGTTCCGAAGAAACGAAAGGTTAATGGGTTTTATTCTCTTGGTGTTATTCCTGGTGAGGCTGAAGATTTCAGCAGTGGTTCAGGGTCTTGGTGCAGTGAAGGGTCATATTGGGCTAGTGAGGTTTTATCGAATTCGAATTCTACGCCATTGAATGGTAGAACAGCAATGGAGCAAGGCTCTGAAAGGATTCGGCCTGCTTTGTTGCGGTCGTCTCGTGGTCGCTCTCAAATGCTTCCATCAAGGTTTAGTGATTCTGTTATTGGTAAATGGAAGAATCGGGGGATTAAAGTGGAGGATGCAGATTCCAGCTTTGAGGATGATAATATTAAGGGGGTTAGTGGATTGGGATTTGTGAAACAGGAGAATGGGAATAAATATGGCTCCAAAAAGTTGAAGTATTATTCATATCCTGACATGGAGGAGGAGGAGGAATCAGGATTTGATGACTCGGGTTTAAACAGTTTTGATCACAGGAAGCTTACTAATTCTTTTAGTACTACTAGAATGTCAATTAATGGGAATCGTTCATCGGCAGTTAAAACTGAGAGTTATACGTCTGGTTTGAGTTTTGAGGGTGTGGACCAAAAGCTTTACCGAAATACTGCAAAAAGGAAGGATTTATATAAACCGGAGGATTTTGCTTTGGGTGACATTGTTTGGGCAAAGTGTGGAAAGAGATATCCGGCTTGGCCTGCTGTAGTGATTGATCCTTTCTTGCAGGCTCCTAATTCCGTTCTGAGCTGTTGTGTTCCTGGTGCGATTTGTGTGATGTTTTTTGGGTATTCGAAAAACGGAAAGCAAAGGGACTACGCGTGGGTGAAGCAGGGAATGATATTCCCCTTCATGGAGTTCATGGACAGATTCCAGGGGCAGACTCGGCTGTACAAGAGCAAACAGAGTGACTTTCAGATGGCACTGGAGGAGGCGCTGTTGGCAGAAGATGGTTTTCTGGATTCACATAAGGGAGCTGAGCAGATAACAAATGCGGAAGCCGGTCCCAATGGGTTTATGGGAGCTACAAGTTCATATGTTGATCCTGAATATGACTCTCGAGACCTGGATGTGAGACCTTGTGCTGGCTGTGGTCTGACTTTGCCCTGCAAAATCATGAAGAAGATCAAAGATTCCAATTCTTCAGCTCAACTTTATTGCAAACTTTGTGCTAAGTTACGAAAATCAAAACAATATTGTGGTATTTGCAAAAAGATCTGGCACCATTCAGATGGTGGGAATTGGGTGTGTTGTGACGGTTGCAATGTTTGGATTCATGCTGAATGTGCTAAAATACCCCATAAACTTCTAAAGGATCTGGAACATATTGATTACTATTGTCCAGATTGCAAAGCAAATTCCAACCGTAAATTTTCACAATCACAAACATGCAAGCCAAAAATCAAGTCAACAGAAAATGGCCAAAAGCCTGTTATACCTGATACAATAACAGTGGTGTGCAATGGTGTGGATGGGGATTACATTCCAAAGCTTCATCTAGTCATGTGCAAGTGTGGCTCATGTGGGGTGCGAAAGCAGACACTGGGTGAATGGGAACGGCATGCAGGTTGCAGGGCTAAAAAATGGAAATATAGTGTGAAAGTAAAGAGTACAATGCTTCCTCTTGTACAATGGATCGCAGAAAACAATACACACAGTGGAATTTCGATGCAGTTAGATCAACAGCAGGTACTTGCCTTTCTGCAAGAGAAGTATGAACCAGTTTATCCAAAGTGGACTACAGAAAGATGTGCTGTCTGCAGATGGGTTGAAGATTGGGATGATAACAAAATTATCATCTGCAACAGGTGTCAAATAGCAGTCCACCAAGAATGCTATGGAGCAAAAAATGTCAAAGATTTTACCTCTTGGGTCTGTAGAGTGTGCGAAACCCCTGATGTTGAGAGAGAGTGTTGCCTTTGTCCTGTAAAAGGTGGAGCTCTAAAGCCAACTGATGTTGAGATGCTATGGGTTCATGTCACATGCGCTTGGTTCCGGCCCGAAGTTGGATTCTCAAACCATGAGACAATGGAACCTGCCTTTGGAATCCTTAAAATTCCTCCGAGTTCCTTTTCTAAGACTTGTGTTATCTGTAAACAAAGCCATGGATCCTGTGCAAGTTGTTGCAAGTGTGCTACACCTTTTCATGTGATGTGTGCATCTAGGGCCGGATACAGCATGGAATTGCATTCTATGGAGAAGAATGGAGCTCTGATAACGAAGAAGTTAATATATTGTGCATTTCACAGGCTTCCAACCCCAGATTCTGTAATGGTTGTGCACACTCCCTTGGGGGTCTTCTCTCCCAGAACTTCACTGCAAAATCACAAGGGATGTTTCAGGGGTTCGAGGCTGGTATCATCAAAAAATATTCAACTTCTTGAATCTTCAGCACCTGAGACTAATGAATTTGAACCACTATCTGCTGCAAGATGCCGTGCTTATAGAAGGTCTTCCAAGAAGGCTGACGAGCCAATAATACATCTAGTGAGGGGCCGAAGTCGTCATTCATTAAGTTCTATAATTCAATTGAACACCTATAAGGACTCAGGAGATTCTAAAGTATTTACTTCATTCAAGGAACGTCTTCACCATTTGCAGAAAACTGAGAATCATCGAGTTTGCTTTGGAAAATCGGGGATACATGGATGGGGTCTCTTTGCTCGTAGGGATATACAAGAAGGAGAGATGGTTGCTGAGTATCGTGGTGAGCATGTAAGACGAAGTGTTGCTGATATGAGGGAGGCCAAGTACCGTTCAGAAGGCAAAGACTGTTATCTGTTCAAGATCAGTGAGGAAGTGGTCATCGATGCAACACATAGGGGAAATATAGCACGCCTGATAAACCACTCTTGCATGCCTAACTGTTATGCAAGGATTATGAGCATGGGTGCTGAGGAGAGTCGGATTGTTCTTATTGCCAAGACTCATGTTTCTGCCGGGGAAGAACTAACGTATGATTACTTGTTTGATCCGGATGAGCGGGATGAACTGAAAGTTCCTTGCCTTTGTAAAGCCCCCAATTGTAGGAAATTTATGAATTAG 3120 0.4304 MIIKRTMKTEMPNLKRCKLEEEQDSEENVPKKRKVNGFYSLGVIPGEAEDFSSGSGSWCSEGSYWASEVLSNSNSTPLNGRTAMEQGSERIRPALLRSSRGRSQMLPSRFSDSVIGKWKNRGIKVEDADSSFEDDNIKGVSGLGFVKQENGNKYGSKKLKYYSYPDMEEEEESGFDDSGLNSFDHRKLTNSFSTTRMSINGNRSSAVKTESYTSGLSFEGVDQKLYRNTAKRKDLYKPEDFALGDIVWAKCGKRYPAWPAVVIDPFLQAPNSVLSCCVPGAICVMFFGYSKNGKQRDYAWVKQGMIFPFMEFMDRFQGQTRLYKSKQSDFQMALEEALLAEDGFLDSHKGAEQITNAEAGPNGFMGATSSYVDPEYDSRDLDVRPCAGCGLTLPCKIMKKIKDSNSSAQLYCKLCAKLRKSKQYCGICKKIWHHSDGGNWVCCDGCNVWIHAECAKIPHKLLKDLEHIDYYCPDCKANSNRKFSQSQTCKPKIKSTENGQKPVIPDTITVVCNGVDGDYIPKLHLVMCKCGSCGVRKQTLGEWERHAGCRAKKWKYSVKVKSTMLPLVQWIAENNTHSGISMQLDQQQVLAFLQEKYEPVYPKWTTERCAVCRWVEDWDDNKIIICNRCQIAVHQECYGAKNVKDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVGFSNHETMEPAFGILKIPPSSFSKTCVICKQSHGSCASCCKCATPFHVMCASRAGYSMELHSMEKNGALITKKLIYCAFHRLPTPDSVMVVHTPLGVFSPRTSLQNHKGCFRGSRLVSSKNIQLLESSAPETNEFEPLSAARCRAYRRSSKKADEPIIHLVRGRSRHSLSSIIQLNTYKDSGDSKVFTSFKERLHHLQKTENHRVCFGKSGIHGWGLFARRDIQEGEMVAEYRGEHVRRSVADMREAKYRSEGKDCYLFKISEEVVIDATHRGNIARLINHSCMPNCYARIMSMGAEESRIVLIAKTHVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRKFMN 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1669 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 604 657 IPR013083 -
Mibi11g1669 1039 SUPERFAMILY FYVE/PHD zinc finger 607 671 IPR011011 -
Mibi11g1669 1039 ProSitePatterns Zinc finger PHD-type signature. 609 654 IPR019786 -
Mibi11g1669 1039 SMART PWWP_4 241 310 IPR000313 -
Mibi11g1669 1039 ProSiteProfiles Zinc finger PHD-type profile. 606 657 IPR019787 -
Mibi11g1669 1039 Pfam PWWP domain 244 339 IPR000313 -
Mibi11g1669 1039 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1039 IPR025780 -
Mibi11g1669 1039 ProSiteProfiles Extended PHD (ePHD) domain profile. 660 775 IPR034732 -
Mibi11g1669 1039 Pfam PHD-zinc-finger like domain 662 774 - -
Mibi11g1669 1039 CDD PHD_TCF19_like 425 475 - -
Mibi11g1669 1039 FunFam Histone-lysine N-methyltransferase 872 1039 - -
Mibi11g1669 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 658 776 IPR013083 -
Mibi11g1669 1039 ProSiteProfiles Zinc finger PHD-type profile. 422 478 IPR019787 -
Mibi11g1669 1039 SUPERFAMILY FYVE/PHD zinc finger 422 480 IPR011011 -
Mibi11g1669 1039 ProSiteProfiles PWWP domain profile. 243 312 IPR000313 -
Mibi11g1669 1039 PANTHER PHD FINGER PROTEINS 12 1016 - -
Mibi11g1669 1039 Gene3D SET domain 834 1039 IPR046341 -
Mibi11g1669 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 416 483 IPR013083 -
Mibi11g1669 1039 SMART PostSET_3 1023 1039 IPR003616 -
Mibi11g1669 1039 CDD PHD_ATX3_4_5_like 608 654 IPR042011 -
Mibi11g1669 1039 SMART set_7 897 1020 IPR001214 GO:0005515
Mibi11g1669 1039 SUPERFAMILY Tudor/PWWP/MBT 234 342 - -
Mibi11g1669 1039 CDD SET_SETD1-like 886 1035 - -
Mibi11g1669 1039 Gene3D - 229 345 - -
Mibi11g1669 1039 ProSiteProfiles Post-SET domain profile. 1023 1039 IPR003616 -
Mibi11g1669 1039 Pfam PHD-finger 621 655 - -
Mibi11g1669 1039 ProSiteProfiles SET domain profile. 897 1014 IPR001214 GO:0005515
Mibi11g1669 1039 SUPERFAMILY SET domain 890 1036 IPR046341 -
Mibi11g1669 1039 Pfam PHD-finger 424 477 IPR019787 -
Mibi11g1669 1039 SMART PHD_3 424 476 IPR001965 -
Mibi11g1669 1039 SMART PHD_3 719 775 IPR001965 -
Mibi11g1669 1039 SMART PHD_3 608 655 IPR001965 -
Mibi11g1669 1039 Pfam SET domain 908 1013 IPR001214 GO:0005515
Mibi11g1669 1039 FunFam Histone-lysine N-methyltransferase 658 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1669 Mibi-ChrMibi11 37584004 37591681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1669 609 765 C2H2 Transcription Factor Family AT3G14740 33.537 1.84e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi11g1669 zf-HC5HC2H_2 1.2e-28 CL0390