Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1642 ATGGGAAGAGCTCCGTGTTGTGCAAAAGTAGGATTACACAGAGGTCCATGGACTCCTAAAGAAGATGCATTGCTCACTAAGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCTAAAAAAGCTGGGCTTTTAAGATGTGGAAAAAGTTGTAGACTAAGATGGATGAACTATTTGAGACCAGACATAAAGAGAGGCAACATAACCGCCGAAGAAGACGACCTCATCATCAGAATGCATTCTCTTATCGGAAACCGGTGGTCTCTCATTGCCGGCCGGTTACCAGGCCGAACAGATAATGAAATCAAGAACTATTGGAACACTCATCTTAGCAAAAGACTCAAAGCACTTGATCATCATCAATCAATTATAAGAGACGATAAGGCTAAGAAGAATAAGAATAGCAAGAAGAAGAAGAAGAAGCCCACAAAAAATAGCAATGATAATAATAATGTGGAGGAAGATGAAGCAGAGAAGAAGACGAATATATATCTTCCAAAGCCAATTAGGATTAGGGCTTTACATATAAGTAAAAATGAAGAGGAGTGCAAGAATAACAATAGTTCTTCTACTTCTGCAAGTGGATCTATTTCAGGTCAAGAGGTATTTTTACAAAAGGAAGATATGGATCATGTGATGAGTTATTATGAGCCGTTTGGTGGTGAAAATAATGATGTGTTTGGGTTTTTTGCGGAAGATCAAAATATTGACAGAGTCAACGGATCAACATCAGAAGAGCATATTAATGATATTTTTAATATTGATAATAATGATATGGAATGCGAGTCATTGGAGAGGCTATATGAGGAGTATTTGCAGCTCTTAAAGGAGGATGATATTAATGTTTGTGATGAAAACCAAGGGCAATTGGATTCTTTCGCTCAATCTTTGTTTCTCTAA 906 0.3742 MGRAPCCAKVGLHRGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITAEEDDLIIRMHSLIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRLKALDHHQSIIRDDKAKKNKNSKKKKKKPTKNSNDNNNVEEDEAEKKTNIYLPKPIRIRALHISKNEEECKNNNSSSTSASGSISGQEVFLQKEDMDHVMSYYEPFGGENNDVFGFFAEDQNIDRVNGSTSEEHINDIFNIDNNDMECESLERLYEEYLQLLKEDDINVCDENQGQLDSFAQSLFL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1642 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi11g1642 301 FunFam Myb transcription factor 11 67 - -
Mibi11g1642 301 MobiDBLite consensus disorder prediction 119 161 - -
Mibi11g1642 301 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 214 - -
Mibi11g1642 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi11g1642 301 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi11g1642 301 MobiDBLite consensus disorder prediction 146 161 - -
Mibi11g1642 301 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi11g1642 301 CDD SANT 71 112 IPR001005 -
Mibi11g1642 301 SMART sant 66 114 IPR001005 -
Mibi11g1642 301 SMART sant 13 63 IPR001005 -
Mibi11g1642 301 Gene3D - 71 164 - -
Mibi11g1642 301 Gene3D - 14 66 - -
Mibi11g1642 301 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi11g1642 301 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi11g1642 301 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi11g1642 301 CDD SANT 16 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1642 Mibi-ChrMibi11 37233563 37235124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1642 1 137 MYB Transcription Factor Family AT5G49330 65.493 3.16e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g1642 Myb_DNA-binding 7.4e-14 CL0123