Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1613 ATGACCCTGAGCAAGAGGCCAGAGGAGCACTATAAAGAAGCAACAAATGAATTTGAGAGACTTAAACCTTTAAATAACATCAATTCACCAGCATACTATTGCATTAATTCAAACCCCAAAAGAAAGATGTCATCCCATTATAGTGAATTCTCTCATTCTGCAGCATCACAAACATACAATAGCACCACACCTACTTCATCATCATCATCATCACCAACAAGAACATGGAGCATCGGCAGGAAGAAGAAGAAGAATAGCAGCAATAACAACAAGAAAAGGTTCAGTGAGGAACAAATCAAGTTATTGGAATCTATTTTCGAGACAGAATCCAACAAGCTTGACCACACCAAAAAATTGCAGCTTGCTTCAGAGCTTGGCTTGGAGCCTCGCCAGGTTGCCATTTGGTTTCAGAACAGACGAGCTCGATCCAAGTCAAAGCAAATACAACGTTCCTACTCTCTACTCCAATCAAATTATGACTCTTTGGCTTCCAAATTTGAAGCCCTCAAGAAGGAGAACCAGGCATTACTGCTAGAGTTGCAGAAGCTGAAAGTGAAAGATATGGAAGATCAGGCCTTTTGTTGTAAGAAGGTGAGAGATGGGAATTTGGTGAACAGAGAGTGTGGTGAAGCAGAGGTGAAGCAGAGTAGTCAATCAATGGAAAGACCAGAAAAGATACTTGGGGTTCTTTCAGATGATGATAGGAGCATGAAGGTGGAGTATTTTGGGGTTGAAGATGAACCTACCATTCTGAACTTGGATGACAAGAAAAAAGATGGTTCCTTGGCTTCACAAGAAGGTTGGGGAAATCTTGAATCTGCTGATGATTTCTTAGCCCAGTCTAATGACAGTGCTTATCAATGGTGGGACTTCTGGTCCTGA 882 0.415 MTLSKRPEEHYKEATNEFERLKPLNNINSPAYYCINSNPKRKMSSHYSEFSHSAASQTYNSTTPTSSSSSSPTRTWSIGRKKKKNSSNNNKKRFSEEQIKLLESIFETESNKLDHTKKLQLASELGLEPRQVAIWFQNRRARSKSKQIQRSYSLLQSNYDSLASKFEALKKENQALLLELQKLKVKDMEDQAFCCKKVRDGNLVNRECGEAEVKQSSQSMERPEKILGVLSDDDRSMKVEYFGVEDEPTILNLDDKKKDGSLASQEGWGNLESADDFLAQSNDSAYQWWDFWS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1613 293 ProSitePatterns 'Homeobox' domain signature. 121 144 IPR017970 GO:0000981|GO:0006355
Mibi11g1613 293 SMART HOX_1 87 150 IPR001356 GO:0003677
Mibi11g1613 293 Pfam Homeodomain 90 144 IPR001356 GO:0003677
Mibi11g1613 293 PRINTS Lambda-repressor HTH signature 117 126 IPR000047 GO:0003677
Mibi11g1613 293 PRINTS Lambda-repressor HTH signature 126 142 IPR000047 GO:0003677
Mibi11g1613 293 SUPERFAMILY Homeodomain-like 67 147 IPR009057 -
Mibi11g1613 293 CDD homeodomain 93 147 IPR001356 GO:0003677
Mibi11g1613 293 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 66 217 IPR045224 GO:0003700
Mibi11g1613 293 MobiDBLite consensus disorder prediction 41 92 - -
Mibi11g1613 293 Gene3D - 79 153 - -
Mibi11g1613 293 Coils Coil 152 186 - -
Mibi11g1613 293 Pfam Homeobox associated leucine zipper 146 186 IPR003106 GO:0006355|GO:0043565
Mibi11g1613 293 MobiDBLite consensus disorder prediction 41 76 - -
Mibi11g1613 293 ProSiteProfiles 'Homeobox' domain profile. 85 146 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1613 Mibi-ChrMibi11 36764237 36765221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1613 77 293 Homeobox Transcription Factor Family AT2G46680 41.004 6.03e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi11g1613 Homeodomain 2e-16 CL0123